RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 ARHGAP11BQ3KRB8 267 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 SLC9B1Q4ZJI4 515 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 PDCD4Q53EL6 469 aaKnown RBP11.59□□□□□ -0.55
CHMP3-208ENST00000486404 GPAT3Q53EU6 434 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 ESPNLQ6ZVH7 1005 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 HDXQ7Z353 690 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 LURAP1LQ8IV03 231 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 OR10D3Q8NH80 312 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 OR2V1Q8NHB1 315 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 XAGE5Q8WWM1 108 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 ZNF75CPQ92670 426 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-208ENST00000486404 RAB8BQ92930 207 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 REXO5Q96IC2 774 aaKnown RBP11.59□□□□□ -0.55
CHMP3-208ENST00000486404 TEX37Q96LM6 180 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 KLHL15Q96M94 604 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 GPATCH1Q9BRR8 931 aaKnown RBP11.59□□□□□ -0.55
CHMP3-208ENST00000486404 POLDIP3Q9BY77 421 aaKnown RBP11.59□□□□□ -0.55
CHMP3-208ENST00000486404 ZNF350Q9GZX5 532 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 CLEC4MQ9H2X3 399 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-208ENST00000486404 POLE3Q9NRF9 147 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 DNAJB12Q9NXW2 375 aaKnown RBP11.59□□□□□ -0.55
CHMP3-208ENST00000486404 JKAMPQ9P055 326 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 MKLN1Q9UL63 735 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 EMC9Q9Y3B6 208 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 BOLA1Q9Y3E2 137 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 GPR45Q9Y5Y3 372 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 GPC6Q9Y625 555 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-208ENST00000486404 USH1CQ9Y6N9 552 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 PDZD2O15018 2839 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 CCDC168Q8NDH2 2452 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 CCDC154A6NI56 674 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 A6NNC1 897 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 NPIPB9F8W1W9 429 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 RFXANKO14593 260 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 TNFSF11O14788 317 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 MSTNO14793 375 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 POLR3GO15318 223 aaPredicted RBP11.58□□□□□ -0.56
CHMP3-208ENST00000486404 CXCL13O43927 109 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 EIF4E2O60573 245 aaKnown RBP11.58□□□□□ -0.56
CHMP3-208ENST00000486404 SCN2BO60939 215 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 TNFSF13O75888 250 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 ANP32DO95626 131 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 OPN1LWP04000 364 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 IL6P05231 212 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 LINGO3P0C6S8 592 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 KCNJ5P48544 419 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 CTBP2P56545 445 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 PHC1P78364 1004 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 TXNL4AP83876 142 aaKnown RBP11.58□□□□□ -0.56
CHMP3-208ENST00000486404 ZNF141Q15928 474 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 TIGD2Q4W5G0 525 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 TTMPQ5BVD1 217 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 HBMQ6B0K9 141 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 VWA1Q6PCB0 445 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 CBLN3Q6UW01 205 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 ZNF621Q6ZSS3 439 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 EIF3MQ7L2H7 374 aaKnown RBP11.58□□□□□ -0.56
CHMP3-208ENST00000486404 OLIG3Q7RTU3 272 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 RNF130Q86XS8 419 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 LILRA2Q8N149 483 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 MIER2Q8N344 545 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 OR5W2Q8NH69 310 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 FBXO27Q8NI29 283 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 ROPN1LQ96C74 230 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 MAELQ96JY0 434 aaKnown RBP11.58□□□□□ -0.56
CHMP3-208ENST00000486404 C7orf26Q96N11 449 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 RMND5AQ9H871 391 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 RNF122Q9H9V4 155 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 TIGARQ9NQ88 270 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 ZIM2Q9NZV7 527 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 ICAM5Q9UMF0 924 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 PROCRQ9UNN8 238 aa11.58□□□□□ -0.56
CHMP3-208ENST00000486404 CSMD1Q96PZ7 3565 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 MPDZO75970 2070 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 HMGB1P1B2RPK0 211 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-208ENST00000486404 FCMRO60667 390 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 KRT75O95678 551 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 GSNP06396 782 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 UBTFL6P0CB48 400 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-208ENST00000486404 PRKCAP17252 672 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 ADH6P28332 368 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 IL12AP29459 219 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 SLC7A1P30825 629 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 SELENBP1Q13228 472 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 SKP2Q13309 424 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 QPRTQ15274 297 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 C6orf10Q5SRN2 563 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 TYW3Q6IPR3 259 aaKnown RBP11.57□□□□□ -0.56
CHMP3-208ENST00000486404 HEPHL1Q6MZM0 1159 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 MAVSQ7Z434 540 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 ZNF619Q8N2I2 560 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 ATP6V1C2Q8NEY4 427 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 LINC01560Q8TB33 94 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 POC1BQ8TC44 478 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 PNPT1Q8TCS8 783 aaKnown RBP11.57□□□□□ -0.56
CHMP3-208ENST00000486404 OIT3Q8WWZ8 545 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 MRGPRX4Q96LA9 322 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 OR52B2Q96RD2 323 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 NPAS1Q99742 590 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms