RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 SMYD3Q9H7B4 428 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 SUDS3Q9H7L9 328 aaPredicted RBP4.8□□□□□ -1.64
RTN4-214ENST00000486085 NT5DC2Q9H857 520 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 ACOXLQ9NUZ1 547 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 RARRES3Q9UL19 164 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 ASB3Q9Y575 518 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 SZT2Q5T011 3432 aa4.8□□□□□ -1.64
RTN4-214ENST00000486085 CLUHO75153 1309 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 ACOD1A6NK06 481 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 A8MXQ7 604 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 XPO1O14980 1071 aaKnown RBP4.79□□□□□ -1.64
RTN4-214ENST00000486085 IGHG1P01857 330 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 NEFHP12036 1026 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 AREGP15514 252 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 GATA1P15976 413 aaPredicted RBP4.79□□□□□ -1.64
RTN4-214ENST00000486085 ACADSBP45954 432 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 BRCC3P46736 316 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 TRPC1P48995 793 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 TUFMP49411 452 aaKnown RBP4.79□□□□□ -1.64
RTN4-214ENST00000486085 GSK3BP49841 420 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 KLK7P49862 253 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 LIMK2P53671 638 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 SMC1AQ14683 1233 aaKnown RBP4.79□□□□□ -1.64
RTN4-214ENST00000486085 FAM182AQ5T1J6 154 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 C9orf66Q5T8R8 295 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 C1orf189Q5VU69 101 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 WSCD1Q658N2 575 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 RTL6Q6ICC9 239 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 PAQR9Q6ZVX9 377 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 NUFIP2Q7Z417 695 aaKnown RBP4.79□□□□□ -1.64
RTN4-214ENST00000486085 ITIH5Q86UX2 942 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 SLC25A42Q86VD7 318 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 LEMD2Q8NC56 503 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 OR10T2Q8NGX3 314 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 OR2L2Q8NH16 312 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 MRPL38Q96DV4 380 aaKnown RBP4.79□□□□□ -1.64
RTN4-214ENST00000486085 SMARCD1Q96GM5 515 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 C16orf58Q96GQ5 468 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 RPGRIP1Q96KN7 1286 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 RUNDC3BQ96NL0 473 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 ATP6V0BQ99437 205 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 TRIM62Q9BVG3 475 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 DUSP16Q9BY84 665 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 SLC25A19Q9HC21 320 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 PIGVQ9NUD9 493 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 NDUFA13Q9P0J0 144 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.79□□□□□ -1.64
RTN4-214ENST00000486085 FBXO7Q9Y3I1 522 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 TEX264Q9Y6I9 313 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 MTCL1Q9Y4B5 1905 aaKnown RBP4.79□□□□□ -1.64
RTN4-214ENST00000486085 BRWD1Q9NSI6 2320 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 PLXNA4Q9HCM2 1894 aa4.79□□□□□ -1.64
RTN4-214ENST00000486085 PLXNA3P51805 1871 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 TEX48A0A1B0GUV7 120 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 TXNL1O43396 289 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 GALR3O60755 368 aaPredicted RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 HSF2BPO75031 334 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 BAG2O95816 211 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 CA3P07451 260 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 HOXD4P09016 255 aaPredicted RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 OR9G9P0C7N8 305 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 ZDHHC11BP0C7U3 371 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 MBL2P11226 248 aaPredicted RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 CYLC1P35663 651 aaPredicted RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 PITPNBP48739 271 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 CNN1P51911 297 aaKnown RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 SLC8A3P57103 927 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 RPL10AP62906 217 aaKnown RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 CCZ1BP86790 482 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 CCZ1P86791 482 aaPredicted RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 KLHL30Q0D2K2 578 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 BST2Q10589 180 aaKnown RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 PLD1Q13393 1074 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 PSMD5Q16401 504 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 DNAJC21Q5F1R6 531 aaKnown RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 EMBQ6PCB8 327 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 CLEC20AQ6ZU45 233 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 ZNF571Q7Z3V5 609 aaPredicted RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 BNIPLQ7Z465 357 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 CCDC71Q8IV32 467 aaPredicted RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 ZNF781Q8N8C0 355 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 TMEM35BQ8NCS4 154 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 OR1K1Q8NGR3 316 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 OR4Q3Q8NH05 313 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 NT5C3BQ969T7 300 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 DTD2Q96FN9 168 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 NAP1L3Q99457 506 aaPredicted RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 RAB11FIP5Q9BXF6 653 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 TMEM245Q9H330 911 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 HAUS4Q9H6D7 363 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 NHEJ1Q9H9Q4 299 aaPredicted RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 DMAP1Q9NPF5 467 aaPredicted RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 PRMT8Q9NR22 394 aaPredicted RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 HMGXB4Q9UGU5 601 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 SUN2Q9UH99 717 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 XPO7Q9UIA9 1087 aaKnown RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 APPL1Q9UKG1 709 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 TSPAN16Q9UKR8 245 aa4.78□□□□□ -1.64
RTN4-214ENST00000486085 DIMT1Q9UNQ2 313 aaKnown RBP4.78□□□□□ -1.64
RTN4-214ENST00000486085 PRG3Q9Y2Y8 225 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms