RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 UBQLN4Q9NRR5 601 aa5.17□□□□□ -1.58
CUX1-208ENST00000485792 ZCCHC3Q9NUD5 404 aaKnown RBP5.17□□□□□ -1.58
CUX1-208ENST00000485792 ARGLU1Q9NWB6 273 aaPredicted RBP5.17□□□□□ -1.58
CUX1-208ENST00000485792 MRTO4Q9UKD2 239 aaKnown RBP5.17□□□□□ -1.58
CUX1-208ENST00000485792 PRDM4Q9UKN5 801 aa5.17□□□□□ -1.58
CUX1-208ENST00000485792 ICAM5Q9UMF0 924 aa5.17□□□□□ -1.58
CUX1-208ENST00000485792 DSPPQ9NZW4 1301 aa5.17□□□□□ -1.58
CUX1-208ENST00000485792 ITPR3Q14573 2671 aa5.17□□□□□ -1.58
CUX1-208ENST00000485792 ANK3Q12955 4377 aaKnown RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 TRGV8A0A0C4DH27 118 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 A0A0G2JNJ9 132 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 FAM221AA4D161 298 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 CLDN24A6NM45 220 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 NPIPA2E9PIF3 369 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 NPIPA3F8WFD2 350 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 HMGN4O00479 90 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 UBDO15205 165 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 TMPRSS2O15393 492 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 EFNA2O43921 213 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 FCMRO60667 390 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 SLC22A3O75751 556 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 KCNH1O95259 989 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 CLDN14O95500 239 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 ANGPTL1O95841 491 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 AK1P00568 194 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 PF4P02776 101 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 KRT16P08779 473 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 ALOX5P09917 674 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 LINGO3P0C6S8 592 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 KITP10721 976 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 ABOP16442 354 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 CAPN3P20807 821 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 MATN1P21941 496 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 RPS4Y1P22090 263 aaKnown RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 GDF1P27539 372 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 IL12BP29460 328 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 OPRM1P35372 400 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 TRPC1P48995 793 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 ATP4BP51164 291 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 CRYBA2P53672 197 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 ATP12AP54707 1039 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 NUP107P57740 925 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 KRTAP10-9P60411 292 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 POU6F2P78424 691 aaPredicted RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 PLGLB1Q02325 96 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 ID3Q02535 119 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 ZNF155Q12901 538 aaPredicted RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 MAPK14Q16539 360 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 CTU2Q2VPK5 515 aaKnown RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 ACSF3Q4G176 576 aaPredicted RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 WIPI1Q5MNZ9 446 aaPredicted RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 RIPPLY2Q5TAB7 128 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 METTL21CQ5VZV1 264 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 OR5M10Q6IEU7 315 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 BHLHB9Q6PI77 547 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 MARCH3Q86UD3 253 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 MISPQ8IVT2 679 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 PM20D2Q8IYS1 436 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 EID3Q8N140 333 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 TOR1AIP2Q8NFQ8 470 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 OR5M1Q8NGP8 315 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 GPR151Q8TDV0 419 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 DUSP19Q8WTR2 217 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 TSPEARQ8WU66 669 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 CDS1Q92903 461 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 ZG16BQ96DA0 208 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 THOC1Q96FV9 657 aaKnown RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 RMND5BQ96G75 393 aaPredicted RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 AURKBQ96GD4 344 aaPredicted RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 MAGED4Q96JG8 741 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 ADGRG7Q96K78 797 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 OR7D2Q96RA2 312 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 PAIP2Q9BPZ3 127 aaKnown RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 WFDC6Q9BQY6 131 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 SIKE1Q9BRV8 207 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 HOXD1Q9GZZ0 328 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 PAIP1Q9H074 479 aaKnown RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 QRSL1Q9H0R6 528 aaKnown RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 GSX1Q9H4S2 264 aaPredicted RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 TCF7L2Q9NQB0 619 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 SDHAF3Q9NRP4 125 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 INTS9Q9NV88 658 aaKnown RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 SLC25A37Q9NYZ2 338 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 CRIM1Q9NZV1 1036 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 SLAMF8Q9P0V8 285 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 CLCF1Q9UBD9 225 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 B4GALT7Q9UBV7 327 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 ZNF629Q9UEG4 869 aaPredicted RBP5.16□□□□□ -1.58
CUX1-208ENST00000485792 Q9UFV3 132 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 RNF6Q9Y252 685 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 SLC6A5Q9Y345 797 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 OR10H1Q9Y4A9 318 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 ARFGEF3Q5TH69 2177 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 HIVEP1P15822 2718 aa5.16□□□□□ -1.58
CUX1-208ENST00000485792 A0A087WZY1 265 aa5.15□□□□□ -1.59
CUX1-208ENST00000485792 A0A1W2PPR1 153 aa5.15□□□□□ -1.59
CUX1-208ENST00000485792 FAM234BA2RU67 622 aa5.15□□□□□ -1.59
CUX1-208ENST00000485792 OR2M5A3KFT3 312 aa5.15□□□□□ -1.59
CUX1-208ENST00000485792 CCDC154A6NI56 674 aa5.15□□□□□ -1.59
CUX1-208ENST00000485792 FAAHO00519 579 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms