RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 PROCP04070 461 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 YES1P07947 543 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 SERPINB4P48594 390 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 ITGADQ13349 1161 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 IMPG1Q17R60 797 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 MTERF4Q7Z6M4 381 aaKnown RBP11.57□□□□□ -0.56
HDAC6-227ENST00000485102 SLC43A2Q8N370 569 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 SLC16A11Q8NCK7 471 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 NUP43Q8NFH3 380 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 B4GALNT2Q8NHY0 566 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 ZFP28Q8NHY6 868 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 CDC26Q8NHZ8 85 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 TCP10LQ8TDR4 215 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 TMEM158Q8WZ71 300 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 ZBED6CLQ96FA7 236 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-227ENST00000485102 REXO5Q96IC2 774 aaKnown RBP11.57□□□□□ -0.56
HDAC6-227ENST00000485102 EGLN2Q96KS0 407 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 FCRL1Q96LA6 429 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 TRIM2Q9C040 744 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 C12orf49Q9H741 205 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 BARX1Q9HBU1 254 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-227ENST00000485102 ACSS1Q9NUB1 689 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-227ENST00000485102 GIN1Q9NXP7 522 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 LIPT1Q9Y234 373 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 POLR3HQ9Y535 204 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-227ENST00000485102 MAGED1Q9Y5V3 778 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-227ENST00000485102 NBEAL1Q6ZS30 2694 aa11.57□□□□□ -0.56
HDAC6-227ENST00000485102 GOLGA8QA0A0J9YX86 632 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 A0A1W2PP18 115 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 GOLGA8OA6NCC3 632 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 GJE1A6NN92 205 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 RNF212BA8MTL3 300 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 GOLGA8NF8WBI6 632 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 SCDO00767 359 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 PDPK1O15530 556 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 TYROBPO43914 113 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 EFNA2O43921 213 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 GMFGO60234 142 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 PRKD3O94806 890 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 CD8AP01732 235 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 IGHV4-39P01824 125 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 OPN1LWP04000 364 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 ACP2P11117 423 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 NEFHP12036 1026 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 HPGDP15428 266 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 IL32P24001 234 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 ACVR1BP36896 505 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 MAGOHP61326 146 aaKnown RBP11.56□□□□□ -0.56
HDAC6-227ENST00000485102 PDE7AQ13946 482 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 DUSP5Q16690 384 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 HHATQ5VTY9 493 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 RNF165Q6ZSG1 346 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 NUFIP2Q7Z417 695 aaKnown RBP11.56□□□□□ -0.56
HDAC6-227ENST00000485102 ZAR1Q86SH2 424 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 MAPK1IP1LQ8NDC0 245 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 ABHD3Q8WU67 409 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 KISS1RQ969F8 398 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-227ENST00000485102 TLCD1Q96CP7 247 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 MS4A4EQ96PG1 132 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 TRAF4Q9BUZ4 470 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-227ENST00000485102 POTEKPQ9BYX7 375 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 BCO1Q9HAY6 547 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 EQTNQ9NQ60 294 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 DUSP22Q9NRW4 184 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 OXSMQ9NWU1 459 aa11.56□□□□□ -0.56
HDAC6-227ENST00000485102 GPC6Q9Y625 555 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-227ENST00000485102 DPRXA6NFQ7 191 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 ZNF814B7Z6K7 855 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 G3V2L1 256 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 ETV2O00321 342 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-227ENST00000485102 CLOCKO15516 846 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 SEC22BO75396 215 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 UROSP10746 265 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 GPC1P35052 558 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 CDKN1AP38936 164 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 SUMO3P55854 103 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-227ENST00000485102 RAC3P60763 192 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 BSPH1Q075Z2 132 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 HSPB3Q12988 150 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 MLC1Q15049 377 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 CD226Q15762 336 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 NRF1Q16656 503 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 Q6ZT83 130 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 FRMD7Q6ZUT3 714 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 FCRLAQ7L513 359 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.55□□□□□ -0.56
HDAC6-227ENST00000485102 P2RY8Q86VZ1 359 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 TUSC5Q8IXB3 177 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 PHC2Q8IXK0 858 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 RADILQ96JH8 1075 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 STACQ99469 402 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 CCT7Q99832 543 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 KLHDC3Q9BQ90 382 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 BTBD2Q9BX70 525 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 SRXN1Q9BYN0 137 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 HOXD1Q9GZZ0 328 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 REEP4Q9H6H4 257 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 TMEM185BQ9H7F4 350 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 FAIMQ9NVQ4 179 aa11.55□□□□□ -0.56
HDAC6-227ENST00000485102 C1orf109Q9NX04 203 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms