RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 TM2D1Q9BX74 207 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 PUS3Q9BZE2 481 aaKnown RBP1.72□□□□□ -2.13
ITGB1-213ENST00000484088 UPF3BQ9BZI7 483 aaKnown RBP1.72□□□□□ -2.13
ITGB1-213ENST00000484088 TRIM9Q9C026 710 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 C6orf62Q9GZU0 229 aaPredicted RBP1.72□□□□□ -2.13
ITGB1-213ENST00000484088 DRC3Q9H069 523 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 LRRC40Q9H9A6 602 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 YAE1D1Q9NRH1 226 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 FARSBQ9NSD9 589 aaKnown RBP1.72□□□□□ -2.13
ITGB1-213ENST00000484088 ABCC13Q9NSE7 274 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 NUDT15Q9NV35 164 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 RAB20Q9NX57 234 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 SEC14L4Q9UDX3 406 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 CIDEBQ9UHD4 219 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 CYTH4Q9UIA0 394 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 FZR1Q9UM11 496 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 MGAT4AQ9UM21 535 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 B9D1Q9UPM9 204 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 CFL2Q9Y281 166 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 POGZQ7Z3K3 1410 aa1.72□□□□□ -2.13
ITGB1-213ENST00000484088 FRMPD4Q14CM0 1322 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 SH3TC1Q8TE82 1336 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 CCDC180Q9P1Z9 1646 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 IGKV3D-20A0A0C4DH25 116 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 LOC100506127A0A0U1RQW1 187 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 C1orf232A0A0U1RR37 186 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 XKRY2A2RUG3 117 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 MFSD2BA6NFX1 497 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 LRRC30A6NM36 301 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 GOLGA8JA6NMD2 632 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 GOLGA8TH3BQL2 631 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 K7ERI5 159 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 HIP1O00291 1037 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 SLC17A2O00624 439 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 ANGPT2O15123 496 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 RAD51BO15315 384 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 NUDT21O43809 227 aaKnown RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 SSX5O60225 188 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 RAMP1O60894 148 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 IDH1O75874 414 aaKnown RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 RHOBTB1O94844 696 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 OTCP00480 354 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 IFNB1P01574 187 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 JCHAINP01591 159 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 KRT6AP02538 564 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 APOA1P02647 267 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 APOEP02649 317 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 KRT6BP04259 564 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 HMGN1P05114 100 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 CAPN1P07384 714 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 ASNSP08243 561 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 RPS17P08708 135 aaKnown RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 GOLGA8HP0CJ92 632 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 STAG3L3P0CL85 134 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 CCDC166P0CW27 439 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 CALM1P0DP23 149 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 CALM2P0DP24 149 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 CALM3P0DP25 149 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 UMPSP11172 480 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 RALBP11234 206 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 PRPS2P11908 318 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 PVRP15151 417 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 M6PRP20645 277 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 CHMLP26374 656 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 EVI2BP34910 448 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 RPL4P36578 427 aaKnown RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 HTR2BP41595 481 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 ALDH3B2P48448 385 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 STARP49675 285 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 NUMBP49757 651 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 STK19P49842 368 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 RAP1GDS1P52306 607 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 ARHGDIAP52565 204 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 PRRX1P54821 245 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 STX17P56962 302 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 RPS6P62753 249 aaKnown RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 PPIAP62937 165 aaKnown RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 GSTO1P78417 241 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 PRKCEQ02156 737 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 PDZK1IP1Q13113 114 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 NME3Q13232 169 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 ITGB3BPQ13352 177 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 PLD1Q13393 1074 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 RUNX3Q13761 415 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 DDX39BQ13838 428 aaKnown RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 DMC1Q14565 340 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 ABRAXAS2Q15018 415 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 SLC1A5Q15758 541 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 CHRNA6Q15825 494 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 USF2Q15853 346 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 UAP1Q16222 522 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 CARTPTQ16568 116 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 MOGQ16653 247 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 Q1RN00 199 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 C15orf32Q32M92 178 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 KCTD21Q4G0X4 260 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 ZNF57Q68EA5 555 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 SLC25A24Q6NUK1 477 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 ZNF774Q6NX45 483 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 AFTPHQ6ULP2 937 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms