RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 P2RY13Q9BPV8 354 aa3.85□□□□□ -1.79
PTCD3-214ENST00000483925 NIPSNAP3BQ9BS92 247 aa3.85□□□□□ -1.79
PTCD3-214ENST00000483925 Q9HAA7 133 aa3.85□□□□□ -1.79
PTCD3-214ENST00000483925 NMRAL1Q9HBL8 299 aa3.85□□□□□ -1.79
PTCD3-214ENST00000483925 DYRK4Q9NR20 520 aa3.85□□□□□ -1.79
PTCD3-214ENST00000483925 PTTG3PQ9NZH4 202 aa3.85□□□□□ -1.79
PTCD3-214ENST00000483925 BFARQ9NZS9 450 aa3.85□□□□□ -1.79
PTCD3-214ENST00000483925 IFNKQ9P0W0 207 aa3.85□□□□□ -1.79
PTCD3-214ENST00000483925 NUP50Q9UKX7 468 aa3.85□□□□□ -1.79
PTCD3-214ENST00000483925 NEURL4Q96JN8 1562 aa3.85□□□□□ -1.79
PTCD3-214ENST00000483925 IQCMA0A1B0GVH7 501 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 OR6C65A6NJZ3 312 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 TEX46H3BTG2 121 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 NR5A2O00482 541 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 TM9SF1O15321 606 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 PPIHO43447 177 aaKnown RBP3.84□□□□□ -1.79
PTCD3-214ENST00000483925 LATO43561 262 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 RAMP3O60896 148 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 AP2A1O95782 977 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 TMEM50AO95807 157 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 HOXC6P09630 235 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 XRCC1P18887 633 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-214ENST00000483925 ZNF10P21506 573 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-214ENST00000483925 KITLGP21583 273 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 ATP5A1P25705 553 aaKnown RBP3.84□□□□□ -1.79
PTCD3-214ENST00000483925 IFNA8P32881 189 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 RPL4P36578 427 aaKnown RBP3.84□□□□□ -1.79
PTCD3-214ENST00000483925 BDKRB1P46663 353 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 STK19P49842 368 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-214ENST00000483925 RAB10P61026 200 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 TNNC1P63316 161 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 CDK16Q00536 496 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 IRF8Q02556 426 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 ZFP36L1Q07352 338 aaKnown RBP3.84□□□□□ -1.79
PTCD3-214ENST00000483925 CCDC173Q0VFZ6 552 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 CDH17Q12864 832 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 ILKQ13418 452 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 GPR176Q14439 515 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 RBMS2Q15434 407 aaKnown RBP3.84□□□□□ -1.79
PTCD3-214ENST00000483925 MS4A18Q3C1V0 323 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 ODF3L2Q3SX64 289 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 SLC25A52Q3SY17 297 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 Q4G0T1 1027 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 TP53I3Q53FA7 332 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 SHC4Q6S5L8 630 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 PAQR6Q6TCH4 344 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 CYS1Q717R9 158 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 SNX20Q7Z614 316 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 PIP4P1Q86T03 277 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 ISCA2Q86U28 154 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 PIGZQ86VD9 579 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 SLC22A15Q8IZD6 547 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 MYOCDQ8IZQ8 938 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 FBXL14Q8N1E6 418 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 FGFRL1Q8N441 504 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 C15orf54Q8N8G6 183 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 KBTBD3Q8NAB2 608 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 OR4F17Q8NGA8 305 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 OR4F5Q8NH21 305 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 GPR151Q8TDV0 419 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 UBE2E3Q969T4 207 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 ASB9Q96DX5 294 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 C12orf42Q96LP6 360 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 ZNF396Q96N95 335 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-214ENST00000483925 OR4F4Q96R69 305 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 CLCC1Q96S66 551 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 MBOAT4Q96T53 435 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 CYTH2Q99418 400 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 MAPKAP1Q9BPZ7 522 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 LLPHQ9BRT6 129 aaKnown RBP3.84□□□□□ -1.79
PTCD3-214ENST00000483925 GPR174Q9BXC1 333 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 RAB34Q9BZG1 259 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 TM6SF2Q9BZW4 377 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 NMUR1Q9HB89 426 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 MYOZ2Q9NPC6 264 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 CTSFQ9UBX1 484 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 MYO6Q9UM54 1294 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 BARX2Q9UMQ3 279 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-214ENST00000483925 MROH7-TTC4A0A0A0MT08 1334 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 NEDD4P46934 1319 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 SALL1Q9NSC2 1324 aa3.84□□□□□ -1.79
PTCD3-214ENST00000483925 KCNE1BA0A087WTH5 132 aa3.83□□□□□ -1.8
PTCD3-214ENST00000483925 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-214ENST00000483925 KBTBD11-OT1A0A1B0GTJ5 212 aa3.83□□□□□ -1.8
PTCD3-214ENST00000483925 NEDD8-MDP1E9PL57 170 aa3.83□□□□□ -1.8
PTCD3-214ENST00000483925 SOCS2O14508 198 aa3.83□□□□□ -1.8
PTCD3-214ENST00000483925 KDELR3O43731 214 aa3.83□□□□□ -1.8
PTCD3-214ENST00000483925 HCN1O60741 890 aa3.83□□□□□ -1.8
PTCD3-214ENST00000483925 NIPSNAP2O75323 286 aa3.83□□□□□ -1.8
PTCD3-214ENST00000483925 PDE5AO76074 875 aa3.83□□□□□ -1.8
PTCD3-214ENST00000483925 F10P00742 488 aa3.83□□□□□ -1.8
PTCD3-214ENST00000483925 CA1P00915 261 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-214ENST00000483925 EDN1P05305 212 aa3.83□□□□□ -1.8
PTCD3-214ENST00000483925 IGHV4-38-2P0DP08 117 aa3.83□□□□□ -1.8
PTCD3-214ENST00000483925 MYL2P10916 166 aa3.83□□□□□ -1.8
PTCD3-214ENST00000483925 FGF3P11487 239 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-214ENST00000483925 GCAP28676 217 aa3.83□□□□□ -1.8
PTCD3-214ENST00000483925 GPR183P32249 361 aa3.83□□□□□ -1.8
PTCD3-214ENST00000483925 RPL9P32969 192 aaKnown RBP3.83□□□□□ -1.8
PTCD3-214ENST00000483925 SAA4P35542 130 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms