RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 NPIPA8P0DM63 369 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 COX5AP20674 150 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 GCAP28676 217 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 GSTM5P46439 218 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 ZNF41P51814 821 aaPredicted RBP11.35□□□□□ -0.59
UBR4-213ENST00000483922 PRKAA2P54646 552 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 DSCR9P59020 149 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 TIMM23BQ5SRD1 257 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 FAM120AOSQ5T036 256 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.35□□□□□ -0.59
UBR4-213ENST00000483922 NOXRED1Q6NXP6 359 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 CLEC2AQ6UVW9 174 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 TRIM46Q7Z4K8 759 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 RELL1Q8IUW5 271 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 ZNF433Q8N7K0 673 aaPredicted RBP11.35□□□□□ -0.59
UBR4-213ENST00000483922 ATP6V1C2Q8NEY4 427 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 NUP43Q8NFH3 380 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 GPR119Q8TDV5 335 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 L3HYPDHQ96EM0 354 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 C1orf159Q96HA4 380 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 DHRS9Q9BPW9 319 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 SOX7Q9BT81 388 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 PRR14Q9BWN1 585 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 SHARPINQ9H0F6 387 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 RAB17Q9H0T7 212 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 CDC42EP4Q9H3Q1 356 aaKnown RBP11.35□□□□□ -0.59
UBR4-213ENST00000483922 MIEF1Q9NQG6 463 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 CARD8Q9Y2G2 431 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 KCNE3Q9Y6H6 103 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 A0A1W2PQD3 144 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 A0A1W2PR80 420 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 OR5H1A6NKK0 313 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 TTC36A6NLP5 189 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 POC1B-GALNT4F8VUJ3 575 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 RGS14O43566 566 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 H6PDO95479 791 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 FESP07332 822 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 INHBAP08476 426 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 SLC25A16P16260 332 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 PRKCAP17252 672 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 EFNA1P20827 205 aaPredicted RBP11.34□□□□□ -0.59
UBR4-213ENST00000483922 ME2P23368 584 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 NTSP30990 170 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 FRKP42685 505 aaPredicted RBP11.34□□□□□ -0.59
UBR4-213ENST00000483922 LCP2Q13094 533 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 RAB35Q15286 201 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 MST1LQ2TV78 715 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 KLHL26Q53HC5 615 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 PIAS4Q8N2W9 510 aaPredicted RBP11.34□□□□□ -0.59
UBR4-213ENST00000483922 MUC15Q8N387 334 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 CDRT4Q8N9R6 151 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 OR6Y1Q8NGX8 325 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 OR2W6PQ8NHA6 318 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 FAM168AQ92567 244 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 MSI2Q96DH6 328 aaKnown RBP11.34□□□□□ -0.59
UBR4-213ENST00000483922 ADAD1Q96M93 576 aaKnown RBP11.34□□□□□ -0.59
UBR4-213ENST00000483922 USB1Q9BQ65 265 aaKnown RBP11.34□□□□□ -0.59
UBR4-213ENST00000483922 LPAR3Q9UBY5 353 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 PTGDR2Q9Y5Y4 395 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 SLC25A15Q9Y619 301 aa11.34□□□□□ -0.59
UBR4-213ENST00000483922 H7C417 338 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 CYTIPO60759 359 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 IGHV3-9P01782 118 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 ENO1P06733 434 aaKnown RBP11.33□□□□□ -0.6
UBR4-213ENST00000483922 GGT1P19440 569 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 USF1P22415 310 aaPredicted RBP11.33□□□□□ -0.6
UBR4-213ENST00000483922 CD40P25942 277 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 PHBP35232 272 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 EIF1P41567 113 aaKnown RBP11.33□□□□□ -0.6
UBR4-213ENST00000483922 SERPINB9P50453 376 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 ZNF83P51522 516 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 PKNOX1P55347 436 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 RAC3P60763 192 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 LSM11P83369 360 aaKnown RBP eCLIP11.33□□□□□ -0.62e-6■□□□□ 8.7
UBR4-213ENST00000483922 LRIG3Q6UXM1 1119 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 OR52N5Q8NH56 324 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 ZFP90Q8TF47 636 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 PROX1Q92786 737 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 REXO5Q96IC2 774 aaKnown RBP11.33□□□□□ -0.6
UBR4-213ENST00000483922 MRGPRX4Q96LA9 322 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 C1QTNF6Q9BXI9 259 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 L2HGDHQ9H9P8 463 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 TIGARQ9NQ88 270 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 SIRT3Q9NTG7 399 aaPredicted RBP11.33□□□□□ -0.6
UBR4-213ENST00000483922 FAIMQ9NVQ4 179 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 GIN1Q9NXP7 522 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 ZNF180Q9UJW8 692 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 ACTL7BQ9Y614 415 aa11.33□□□□□ -0.6
UBR4-213ENST00000483922 NPIPB9F8W1W9 429 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 ETV2O00321 342 aaPredicted RBP11.32□□□□□ -0.6
UBR4-213ENST00000483922 SCDO00767 359 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 SRD5A1P18405 259 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 ATP5F1P24539 256 aaPredicted RBP11.32□□□□□ -0.6
UBR4-213ENST00000483922 ELK4P28324 431 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 ECHS1P30084 290 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 FABP6P51161 128 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 P2RX1P51575 399 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 RASGEF1BQ0VAM2 473 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 SLC25A53Q5H9E4 307 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 TIFABQ6ZNK6 161 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms