RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	FIGNL2	A6NMB9	653 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	BCKDK	O14874	412 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	TOX	O94900	526 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	PGM3	O95394	542 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	ANGPTL1	O95841	491 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	IGFBP2	P18065	325 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	MSX1	P28360	303 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	MAGEA5	P43359	124 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	PSME3	P61289	254 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	SLC25A3	Q00325	362 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	CDK6	Q00534	326 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	NDUFAF6	Q330K2	333 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	SERPINA11	Q86U17	422 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	FAM109A	Q8N4B1	249 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	FADS6	Q8N9I5	356 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	OR2M3	Q8NG83	312 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	ZNF524	Q96C55	264 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	NSL1	Q96IY1	281 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	ZNF597	Q96LX8	424 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	JSRP1	Q96MG2	331 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	HOPX	Q9BPY8	73 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	ZNF559	Q9BR84	538 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	HOXD1	Q9GZZ0	328 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	UBQLN3	Q9H347	655 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	LDAH	Q9H6V9	325 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	EXO5	Q9H790	373 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	TNFRSF10D	Q9UBN6	386 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	FBXL2	Q9UKC9	423 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	PRDM4	Q9UKN5	801 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	CHST2	Q9Y4C5	530 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	DTNA	Q9Y4J8	743 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	F8	P00451	2351 aa		13.53	□□□□□ -0.24
NR1H3-222	ENST00000483882	OR14I1	A6ND48	311 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	CFAP73	A6NFT4	308 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	AGAP5	A6NIR3	686 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	HNRNPCL1	O60812	293 aa	Known RBP	13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	ACVR2A	P27037	513 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	SLC7A2	P52569	658 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	TFF3	Q07654	80 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	SCARB2	Q14108	478 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	TESK1	Q15569	626 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	RINL	Q6ZS11	566 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	TRIL	Q7L0X0	811 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	PACS2	Q86VP3	889 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	TMEM200A	Q86VY9	491 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	PLCZ1	Q86YW0	608 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	TBL1XR1	Q9BZK7	514 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	DSN1	Q9H410	356 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	MED11	Q9P086	117 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	ABCD2	Q9UBJ2	740 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	ACAD8	Q9UKU7	415 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	BOK	Q9UMX3	212 aa	Predicted RBP	13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	C15orf41	Q9Y2V0	281 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	POLQ	O75417	2590 aa		13.52	□□□□□ -0.25
NR1H3-222	ENST00000483882	EML6	Q6ZMW3	1958 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882		A0A0G2JPF8	293 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	SERINC4	A6NH21	518 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	HNRNPCL2	B2RXH8	293 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	HNRNPCL3	B7ZW38	293 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	SCD	O00767	359 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	NDUFB5	O43674	189 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	IGHG3	P01860	377 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	HNRNPCL4	P0DMR1	293 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	MASP1	P48740	699 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	CRYBA2	P53672	197 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	CRISP3	P54108	245 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	PCBP3	P57721	371 aa	Known RBP	13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	MYBPH	Q13203	477 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	FGFBP1	Q14512	234 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	SLC10A1	Q14973	349 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	CYP51A1	Q16850	503 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	VMAC	Q2NL98	169 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	PRAMEF8	Q5VWM4	474 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	PRAMEF7	Q5VXH5	474 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	CBLN3	Q6UW01	205 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	B3GNT6	Q6ZMB0	384 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	COMTD1	Q86VU5	262 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	VRK2	Q86Y07	508 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	METTL25	Q8N6Q8	603 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	C11orf65	Q8NCR3	313 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	RBM15B	Q8NDT2	890 aa	Known RBP	13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	OR1J4	Q8NGS1	313 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	PHOSPHO1	Q8TCT1	267 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	ARSG	Q96EG1	525 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	SH3GL1	Q99961	368 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	ECSIT	Q9BQ95	431 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	TTYH2	Q9BSA4	534 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	ALKBH4	Q9NXW9	302 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	CALML5	Q9NZT1	146 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	PPP4R1L	Q9P1A2	415 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	TMEM181	Q9P2C4	612 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	PACSIN3	Q9UKS6	424 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	L3MBTL1	Q9Y468	752 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	CSMD2	Q7Z408	3487 aa		13.51	□□□□□ -0.25
NR1H3-222	ENST00000483882	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.5	□□□□□ -0.25
NR1H3-222	ENST00000483882		A0A1B0GVC2	190 aa		13.5	□□□□□ -0.25
NR1H3-222	ENST00000483882	FAM220BP	B1ANY3	271 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms