RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 MISPQ8IVT2 679 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 TUSC5Q8IXB3 177 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 LILRB1Q8NHL6 650 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-221ENST00000483778 RAB3IL1Q8TBN0 382 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 ADAMTS15Q8TE58 950 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 PLPPR2Q96GM1 343 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 COX4I2Q96KJ9 171 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 OR7D2Q96RA2 312 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 ACTR6Q9GZN1 396 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 EML4Q9HC35 981 aaKnown RBP16.05■□□□□ 0.16
ATG4B-221ENST00000483778 IGHV3-15A0A0B4J1V0 119 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 GCM2O75603 506 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-221ENST00000483778 NUDT14O95848 222 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 TUBBP07437 444 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 BPGMP07738 259 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 NUDT17P0C025 328 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 G6PDP11413 515 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 PRKCAP17252 672 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 ENPP1P22413 925 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 ME2P23368 584 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 EDNRAP25101 427 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 ATP12AP54707 1039 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 CASP9P55211 416 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 ZNF239Q16600 458 aaKnown RBP16.04■□□□□ 0.16
ATG4B-221ENST00000483778 SPDYE7PQ495Y7 208 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 ATP6AP1LQ52LC2 224 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 BEX5Q5H9J7 111 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 ZNF704Q6ZNC4 412 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-221ENST00000483778 BEND4Q6ZU67 534 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 PLEKHM3Q6ZWE6 761 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 CLECL1Q8IZS7 167 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 FNDC5Q8NAU1 212 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 RFWD2Q8NHY2 731 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 RNF128Q8TEB7 428 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 CAVIN3Q969G5 261 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 SDF2Q99470 211 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 COQ10BQ9H8M1 238 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 GLRX2Q9NS18 164 aa16.04■□□□□ 0.16
ATG4B-221ENST00000483778 PAQR5Q9NXK6 330 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-221ENST00000483778 ING1Q9UK53 422 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-221ENST00000483778 FAF1Q9UNN5 650 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-221ENST00000483778 A0A1W2PNR3 127 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 C9JVG2 144 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 GTPBP1O00178 669 aaKnown RBP16.03■□□□□ 0.16
ATG4B-221ENST00000483778 CFLARO15519 480 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 TYROBPO43914 113 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 FCMRO60667 390 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 C1QCP02747 245 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 ATP6V1C1P21283 382 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 MAPK1P28482 360 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 ETV4P43268 484 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 PTH2RP49190 550 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 P2RX1P51575 399 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 PGS1Q32NB8 556 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 C20orf204Q6ZNR8 217 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 MTERF4Q7Z6M4 381 aaKnown RBP16.03■□□□□ 0.16
ATG4B-221ENST00000483778 GABRG1Q8N1C3 465 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 OR56A1Q8NGH5 318 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 NEUROG1Q92886 237 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 S100PBPQ96BU1 408 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 ZNF775Q96BV0 537 aaPredicted RBP16.03■□□□□ 0.16
ATG4B-221ENST00000483778 ZBTB9Q96C00 473 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 TUBGCP3Q96CW5 907 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 PKNOX2Q96KN3 472 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 PPP1R36Q96LQ0 422 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 TMEM204Q9BSN7 226 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 DUSP26Q9BV47 211 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 C20orf27Q9GZN8 174 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 DTNAQ9Y4J8 743 aa16.03■□□□□ 0.16
ATG4B-221ENST00000483778 CR1P17927 2039 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 UQCRHLA0A096LP55 91 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 WDR91A4D1P6 747 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 ZNF814B7Z6K7 855 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 BCAS1O75363 584 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-221ENST00000483778 HSPA4LO95757 839 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 HEXAP06865 529 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 PPP3CBP16298 524 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 PSMB1P20618 241 aaKnown RBP16.02■□□□□ 0.16
ATG4B-221ENST00000483778 PRPS1L1P21108 318 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 EIF1P41567 113 aaKnown RBP16.02■□□□□ 0.16
ATG4B-221ENST00000483778 PHC1P78364 1004 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 LSM12Q3MHD2 195 aaKnown RBP16.02■□□□□ 0.16
ATG4B-221ENST00000483778 PDSS1Q5T2R2 415 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 PDZK1Q5T2W1 519 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 OR4F3Q6IEY1 312 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 PRSS57Q6UWY2 283 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 TFAP2EQ6VUC0 442 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 ZNF619Q8N2I2 560 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 RIBC1Q8N443 379 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-221ENST00000483778 ZNF614Q8N883 585 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 SFXN5Q8TD22 340 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.02■□□□□ 0.166e-11■■■■■ 51.9
ATG4B-221ENST00000483778 GSX2Q9BZM3 304 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 HOXD1Q9GZZ0 328 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 QRSL1Q9H0R6 528 aaKnown RBP16.02■□□□□ 0.16
ATG4B-221ENST00000483778 HEATR1Q9H583 2144 aaKnown RBP16.02■□□□□ 0.16
ATG4B-221ENST00000483778 HHATLQ9HCP6 504 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 GPR52Q9Y2T5 361 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 ACTL7BQ9Y614 415 aa16.02■□□□□ 0.16
ATG4B-221ENST00000483778 RTTNQ86VV8 2226 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms