RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 NXF5Q9H1B4 397 aaKnown RBP12.19□□□□□ -0.46
CPNE1-225ENST00000483495 LRRN3Q9H3W5 708 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 MEPEQ9NQ76 525 aaPredicted RBP12.19□□□□□ -0.46
CPNE1-225ENST00000483495 SLC22A11Q9NSA0 550 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 DIMT1Q9UNQ2 313 aaKnown RBP12.19□□□□□ -0.46
CPNE1-225ENST00000483495 RP1P56715 2156 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 IGHV5-10-1A0A0J9YXX1 117 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 IRGMA1A4Y4 181 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 A8MUA0 341 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 CLPXO76031 633 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 CSTAP01040 98 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 HMGN1P05114 100 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 CFIP05156 583 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 LCN1P31025 176 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 RGS6P49758 472 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 LIMK1P53667 647 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 NSDHLQ15738 373 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 TMEM44Q2T9K0 475 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 ARMCX4Q5H9R4 360 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 AADACL4Q5VUY2 407 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 ULK3Q6PHR2 472 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 ZNF440Q8IYI8 595 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 CDK20Q8IZL9 346 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 ANKK1Q8NFD2 765 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 GRHL3Q8TE85 626 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 BPIFA2Q96DR5 249 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 LGALS12Q96DT0 336 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 DTNBP1Q96EV8 351 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 SAMD8Q96LT4 415 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 OR5M11Q96RB7 305 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 LMF1Q96S06 567 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 NUDT9Q9BW91 350 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 OR52D1Q9H346 318 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 UBQLN3Q9H347 655 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 HHATLQ9HCP6 504 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 ATP13A2Q9NQ11 1180 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 UBQLN4Q9NRR5 601 aa12.19□□□□□ -0.46
CPNE1-225ENST00000483495 UNC13CQ8NB66 2214 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 ONECUT2O95948 504 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 INHBBP09529 407 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 VBP1P61758 197 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 RAB40BQ12829 278 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 EBPQ15125 230 aaKnown RBP12.18□□□□□ -0.46
CPNE1-225ENST00000483495 CLPPQ16740 277 aaPredicted RBP12.18□□□□□ -0.46
CPNE1-225ENST00000483495 KLHL22Q53GT1 634 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 ALG10BQ5I7T1 473 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 LAPTM4BQ86VI4 370 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 EID2Q8N6I1 236 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 ZNF527Q8NB42 609 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 PROKR2Q8NFJ6 384 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 OR52I1Q8NGK6 324 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 FANK1Q8TC84 345 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 EFHD2Q96C19 240 aaPredicted RBP12.18□□□□□ -0.46
CPNE1-225ENST00000483495 ARSGQ96EG1 525 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 MGLLQ99685 303 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 FGF20Q9NP95 211 aaPredicted RBP12.18□□□□□ -0.46
CPNE1-225ENST00000483495 CTSFQ9UBX1 484 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 MRTO4Q9UKD2 239 aaKnown RBP12.18□□□□□ -0.46
CPNE1-225ENST00000483495 FBXO4Q9UKT5 387 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 MKL2Q9ULH7 1088 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 ERGIC3Q9Y282 383 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 SIGLEC7Q9Y286 467 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 GPR52Q9Y2T5 361 aa12.18□□□□□ -0.46
CPNE1-225ENST00000483495 EFCAB9A8MZ26 197 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 BHLHE40O14503 412 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 TO15178 435 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 PTP4A3O75365 173 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 RFPL3O75679 317 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 RCBTB2O95199 551 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 RAB36O95755 333 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 ATXN8OSP0DMR3 200 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 CKMT1AP12532 417 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 PTNP21246 168 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 GRK5P34947 590 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 NCS1P62166 190 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 DCTN2Q13561 401 aaKnown RBP12.17□□□□□ -0.46
CPNE1-225ENST00000483495 C3orf38Q5JPI3 329 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 KIRREL2Q6UWL6 708 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 LINC00299Q6ZSB3 139 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 BMP8AQ7Z5Y6 402 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 C9orf40Q8IXQ3 194 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 SLC43A2Q8N370 569 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 NANOGP1Q8N7R0 232 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 OR1N1Q8NGS0 311 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 NDNFQ8TB73 568 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 RNF217Q8TC41 542 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 DYNC2LI1Q8TCX1 351 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 DNAJA4Q8WW22 397 aaPredicted RBP12.17□□□□□ -0.46
CPNE1-225ENST00000483495 RPL3LQ92901 407 aaKnown RBP12.17□□□□□ -0.46
CPNE1-225ENST00000483495 CLIP3Q96DZ5 547 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 MND1Q9BWT6 205 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 TAPBPLQ9BX59 468 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 EXOSC3Q9NQT5 275 aaKnown RBP12.17□□□□□ -0.46
CPNE1-225ENST00000483495 CLEC2DQ9UHP7 191 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 PCDHGA3Q9Y5H0 932 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 COL6A3P12111 3177 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 C2orf92A0A1B0GVN3 265 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 OR6C76A6NM76 312 aa12.17□□□□□ -0.46
CPNE1-225ENST00000483495 KPNA4O00629 521 aaPredicted RBP12.17□□□□□ -0.46
CPNE1-225ENST00000483495 AIREO43918 545 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms