RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 EGLN2Q96KS0 407 aa6.54□□□□□ -1.36
CSDE1-206ENST00000483030 ADAD1Q96M93 576 aaKnown RBP6.54□□□□□ -1.36
CSDE1-206ENST00000483030 C19orf24Q9BVV8 132 aa6.54□□□□□ -1.36
CSDE1-206ENST00000483030 CACNG6Q9BXT2 260 aa6.54□□□□□ -1.36
CSDE1-206ENST00000483030 FUT8Q9BYC5 575 aa6.54□□□□□ -1.36
CSDE1-206ENST00000483030 POTEKPQ9BYX7 375 aa6.54□□□□□ -1.36
CSDE1-206ENST00000483030 MYNNQ9NPC7 610 aa6.54□□□□□ -1.36
CSDE1-206ENST00000483030 UBQLN4Q9NRR5 601 aa6.54□□□□□ -1.36
CSDE1-206ENST00000483030 FAIMQ9NVQ4 179 aa6.54□□□□□ -1.36
CSDE1-206ENST00000483030 TMEM216Q9P0N5 145 aa6.54□□□□□ -1.36
CSDE1-206ENST00000483030 PRSS50Q9UI38 385 aa6.54□□□□□ -1.36
CSDE1-206ENST00000483030 WBP11Q9Y2W2 641 aaKnown RBP6.54□□□□□ -1.36
CSDE1-206ENST00000483030 POLR3HQ9Y535 204 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-206ENST00000483030 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 SERTM1A2A2V5 107 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 ELOA3DA6NLF2 546 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-206ENST00000483030 SCDO00767 359 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 ABCD4O14678 606 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 KCNK2O95069 426 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 NUDT14O95848 222 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 SNRPAP09012 282 aaKnown RBP6.53□□□□□ -1.36
CSDE1-206ENST00000483030 ACP2P11117 423 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 ATP5F1P24539 256 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-206ENST00000483030 EDNRAP25101 427 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 TTKP33981 857 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 OR3A2P47893 321 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 RNF144AP50876 292 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-206ENST00000483030 PRKAA2P54646 552 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 CASP9P55211 416 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 FOXA1P55317 472 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 VLDLRP98155 873 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 LOXL1Q08397 574 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-206ENST00000483030 FOXF1Q12946 379 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 RAB35Q15286 201 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 DUSP5Q16690 384 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 IMPG1Q17R60 797 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 ELOA3BQ3SY89 546 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 CCNJQ5T5M9 372 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 CYB5R2Q6BCY4 276 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 ANKRD26P1Q6NSI1 321 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 NOXRED1Q6NXP6 359 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 LRIG3Q6UXM1 1119 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 Q6ZSR9 355 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 Q6ZT83 130 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 SZRD1Q7Z422 152 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 TDRPQ86YL5 185 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 RELL1Q8IUW5 271 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 MISPQ8IVT2 679 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 SLC43A2Q8N370 569 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 ZNF525Q8N782 197 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 CCNYL1Q8N7R7 359 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 ARIH2OSQ8N7S6 290 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 NUP43Q8NFH3 380 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 ELOA3Q8NG57 546 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 OR6Y1Q8NGX8 325 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 FBXO27Q8NI29 283 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 PHOSPHO1Q8TCT1 267 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 DCAKDQ8WVC6 231 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 CIDECQ96AQ7 238 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-206ENST00000483030 GIMAP5Q96F15 307 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 OTUB1Q96FW1 271 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-206ENST00000483030 C16orf58Q96GQ5 468 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 AMBRA1Q9C0C7 1298 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 SHARPINQ9H0F6 387 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 CDC42EP4Q9H3Q1 356 aaKnown RBP6.53□□□□□ -1.36
CSDE1-206ENST00000483030 CXorf36Q9H7Y0 433 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 MANSC1Q9H8J5 431 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 L2HGDHQ9H9P8 463 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 GP6Q9HCN6 339 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 MID1IP1Q9NPA3 183 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 TMEM160Q9NX00 188 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 ZNF180Q9UJW8 692 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 ING1Q9UK53 422 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-206ENST00000483030 PYCARDQ9ULZ3 195 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 STK38LQ9Y2H1 464 aa6.53□□□□□ -1.36
CSDE1-206ENST00000483030 ALPK2Q86TB3 2170 aa6.52□□□□□ -1.36
CSDE1-206ENST00000483030 PCNX3Q9H6A9 2034 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 CUBNO60494 3623 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 A0A1W2PNR3 127 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 GJE1A6NN92 205 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 E7EQL1 145 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 UBFD1O14562 309 aaKnown RBP6.52□□□□□ -1.37
CSDE1-206ENST00000483030 PDPK1O15530 556 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 OIP5O43482 229 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 AKAP10O43572 662 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 LMX1BO60663 402 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 SEC22BO75396 215 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 IFI6P09912 130 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 ALOX5P09917 674 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 SLC25A16P16260 332 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 GGT1P19440 569 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 IGHV1-2P23083 117 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 ELK4P28324 431 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 LCN1P31025 176 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 FABP6P51161 128 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 ZNF117Q03924 483 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 RASGEF1BQ0VAM2 473 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 TOMM34Q15785 309 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-206ENST00000483030 TIMM23BQ5SRD1 257 aa6.52□□□□□ -1.37
CSDE1-206ENST00000483030 SLC22A25Q6T423 547 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms