RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 NPTX1Q15818 432 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 ZBTB6Q15916 424 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 SFT2D3Q587I9 215 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 UTF1Q5T230 341 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 PXDC1Q5TGL8 231 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 ASPHD1Q5U4P2 390 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 REEP3Q6NUK4 255 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 ARMCX5Q6P1M9 558 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 MON1BQ7L1V2 547 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 TRMT1LQ7Z2T5 733 aaKnown RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 RANBP3LQ86VV4 465 aaPredicted RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 TRIM69Q86WT6 500 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 SFR1Q86XK3 245 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 TGIF2LXQ8IUE1 241 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 CLVS1Q8IUQ0 354 aaPredicted RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 GPALPP1Q8IXQ4 340 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 MB21D2Q8IYB1 491 aaPredicted RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 C10orf67Q8IYJ2 551 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 CYP4Z2PQ8N1L4 340 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 C1orf52Q8N6N3 182 aaKnown RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 C8orf31Q8N9H6 132 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 CDRT4Q8N9R6 151 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 B3GNT7Q8NFL0 401 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 NANPQ8TBE9 248 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 DYDC1Q8WWB3 177 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 SNAPC3Q92966 411 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 RPL36ALQ969Q0 106 aaKnown RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 OMA1Q96E52 524 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 SMIM10Q96HG1 83 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 ZNF582Q96NG8 517 aaPredicted RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 SERPINB11Q96P15 392 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 FMO2Q99518 471 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 COPS8Q99627 209 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 P2RY13Q9BPV8 354 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 ZNF251Q9BRH9 671 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 FUNDC2Q9BWH2 189 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 CHRNA10Q9GZZ6 450 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 EBF3Q9H4W6 596 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 KAT8Q9H7Z6 458 aaKnown RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 SEBOXQ9HB31 216 aaPredicted RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 C19orf12Q9NSK7 152 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 ACSS1Q9NUB1 689 aaPredicted RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 LYARQ9NX58 379 aaKnown RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 IFNKQ9P0W0 207 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 PRPF19Q9UMS4 504 aaKnown RBP3.7□□□□□ -1.82
VPS41-212ENST00000482217 WDR83OSQ9Y284 106 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 POLDIP2Q9Y2S7 368 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 RAP2CQ9Y3L5 183 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 RIPK3Q9Y572 518 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 NISCHQ9Y2I1 1504 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 ADGRL3Q9HAR2 1447 aa3.7□□□□□ -1.82
VPS41-212ENST00000482217 JCADQ9P266 1359 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 PRSS51A0A1B0GVH4 220 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 A0A1W2PPV9 198 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 A0A1W2PQL4 384 aaPredicted RBP3.69□□□□□ -1.82
VPS41-212ENST00000482217 CASTOR2A6NHX0 329 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 LRRC30A6NM36 301 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 NPIPA7E9PJI5 369 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 H0YL77 283 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 H3BNX3 289 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 CCL24O00175 119 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 FBP2O00757 339 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 CCSO14618 274 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 OR10H3O60404 316 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 STX10O60499 249 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 SRPX2O60687 465 aaPredicted RBP3.69□□□□□ -1.82
VPS41-212ENST00000482217 NDUFA7O95182 113 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 RCBTB2O95199 551 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 ETHE1O95571 254 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 TXNDC12O95881 172 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 F10P00742 488 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 IFNA2P01563 188 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 EPOP01588 193 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 CRYABP02511 175 aaKnown RBP3.69□□□□□ -1.82
VPS41-212ENST00000482217 TFPTP0C1Z6 253 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 NPIPA8P0DM63 369 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 CHRNB1P11230 501 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 NR2C1P13056 603 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 HLA-GP17693 338 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 GABRR2P28476 465 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 CALCRP30988 508 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 KDELR2P33947 212 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 MAGEA2P43356 314 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 RFX5P48382 616 aaPredicted RBP3.69□□□□□ -1.82
VPS41-212ENST00000482217 RPL14P50914 215 aaKnown RBP3.69□□□□□ -1.82
VPS41-212ENST00000482217 GEMP55040 296 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 RAG2P55895 527 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 CLDN18P56856 261 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 KCNK10P57789 538 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 UBE2KP61086 200 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 DHODHQ02127 395 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 ZNF33BQ06732 778 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 SELENBP1Q13228 472 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 NR1D2Q14995 579 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 EXOSC7Q15024 291 aaKnown RBP3.69□□□□□ -1.82
VPS41-212ENST00000482217 RBMS2Q15434 407 aaKnown RBP3.69□□□□□ -1.82
VPS41-212ENST00000482217 TSC22D1Q15714 1073 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 ZNF74Q16587 644 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 IMPG1Q17R60 797 aa3.69□□□□□ -1.82
VPS41-212ENST00000482217 APOBEC3HQ6NTF7 200 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms