RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 ZNF724A8MTY0 619 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 DEAF1O75398 565 aaPredicted RBP10.21□□□□□ -0.77
USP11-208ENST00000480104 STK16O75716 305 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 SLITRK5O94991 958 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 NDUFA7O95182 113 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 PPP1R3DO95685 299 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 AHSGP02765 367 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 HPXP02790 462 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 CSF1P09603 554 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 CSNK2A2P19784 350 aaPredicted RBP10.21□□□□□ -0.77
USP11-208ENST00000480104 GATA3P23771 443 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 MAGEA1P43355 309 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 CLK3P49761 638 aaKnown RBP10.21□□□□□ -0.77
USP11-208ENST00000480104 ZNF41P51814 821 aaPredicted RBP10.21□□□□□ -0.77
USP11-208ENST00000480104 UBASH3AP57075 661 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 KLF17Q5JT82 389 aaPredicted RBP10.21□□□□□ -0.77
USP11-208ENST00000480104 GALNT18Q6P9A2 607 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 LRRC70Q7Z2Q7 622 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 FBXO30Q8TB52 745 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 CKAP2Q8WWK9 683 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 SGCDQ92629 289 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 YIPF5Q969M3 257 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 PPP1R14AQ96A00 147 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 BPIFA3Q9BQP9 254 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 MALT1Q9UDY8 824 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 CES1P1Q9UKY3 287 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 CYTIPO60759 359 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 GPANK1O95872 356 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 NPR2P20594 1047 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 PIK3CBP42338 1070 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 VPS41P49754 854 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 FOXF1Q12946 379 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 TGFBIQ15582 683 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 ERCC6LQ2NKX8 1250 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 TMEM176BQ3YBM2 270 aaPredicted RBP10.2□□□□□ -0.78
USP11-208ENST00000480104 OXLD1Q5BKU9 147 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 SLC48A1Q6P1K1 146 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 AGGF1Q8N302 714 aaeCLIP10.2□□□□□ -0.78
USP11-208ENST00000480104 C17orf78Q8N4C9 275 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 RDH5Q92781 318 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 APH1AQ96BI3 265 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 KATNB1Q9BVA0 655 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 ASH2LQ9UBL3 628 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 CTNNAL1Q9UBT7 734 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 VWA7Q9Y334 891 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 RNF114Q9Y508 228 aa10.2□□□□□ -0.78
USP11-208ENST00000480104 ARHGAP32A7KAX9 2087 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 MAGEB16A2A368 324 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 CCDC151A5D8V7 595 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 EFNA2O43921 213 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 PIP5K1CO60331 668 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 CCNT2O60583 730 aaKnown RBP10.19□□□□□ -0.78
USP11-208ENST00000480104 UTS2O95399 124 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 MPIG6BO95866 241 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 CRYAAP02489 173 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 CRYBA1P05813 215 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 PTX3P26022 381 aaPredicted RBP10.19□□□□□ -0.78
USP11-208ENST00000480104 THBS4P35443 961 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 RFX3P48380 749 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 TMEM33P57088 247 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 PRR5P85299 388 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 PSG6Q00889 435 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 ZNF155Q12901 538 aaPredicted RBP10.19□□□□□ -0.78
USP11-208ENST00000480104 ZNF460Q14592 562 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 SLC9B1Q4ZJI4 515 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 TCAIMQ8N3R3 496 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 C1orf162Q8NEQ5 155 aaPredicted RBP10.19□□□□□ -0.78
USP11-208ENST00000480104 OR52E4Q8NGH9 312 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 ZFP90Q8TF47 636 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 JADE3Q92613 823 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 POP5Q969H6 163 aaKnown RBP10.19□□□□□ -0.78
USP11-208ENST00000480104 KLHL29Q96CT2 875 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 RAB39BQ96DA2 213 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 MRGPRX4Q96LA9 322 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 SLC38A2Q96QD8 506 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 FRMD8P1Q9BZ68 369 aaPredicted RBP10.19□□□□□ -0.78
USP11-208ENST00000480104 ZNF442Q9H7R0 627 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 ABHD10Q9NUJ1 306 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 PACSIN2Q9UNF0 486 aaPredicted RBP10.19□□□□□ -0.78
USP11-208ENST00000480104 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.19□□□□□ -0.78
USP11-208ENST00000480104 SOX21Q9Y651 276 aaPredicted RBP10.19□□□□□ -0.78
USP11-208ENST00000480104 CSMD3Q7Z407 3707 aa10.19□□□□□ -0.78
USP11-208ENST00000480104 PDLIM1O00151 329 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 FOXE1O00358 373 aaPredicted RBP10.18□□□□□ -0.78
USP11-208ENST00000480104 RP2O75695 350 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 BCAS2O75934 225 aaPredicted RBP10.18□□□□□ -0.78
USP11-208ENST00000480104 CLPXO76031 633 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 WNT11O96014 354 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 ELK4P28324 431 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 CALCRP30988 508 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 PROK1P58294 105 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 PRPS1P60891 318 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 AVPI1Q5T686 147 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 GRHL2Q6ISB3 625 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 FAM45BPQ6NSW5 357 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 KLHL24Q6TFL4 600 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 IKBIPQ70UQ0 350 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 R3HCC1LQ7Z5L2 792 aaKnown RBP10.18□□□□□ -0.78
USP11-208ENST00000480104 JAZF1Q86VZ6 243 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 WDFY1Q8IWB7 410 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms