RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 EWSR1Q01844 656 aaKnown RBP eCLIP4.26□□□□□ -1.73
BRAF-203ENST00000479537 TIMM50Q3ZCQ8 353 aa4.26□□□□□ -1.73
BRAF-203ENST00000479537 CCDC152Q4G0S7 254 aa4.26□□□□□ -1.73
BRAF-203ENST00000479537 LRRC23Q53EV4 343 aaPredicted RBP4.26□□□□□ -1.73
BRAF-203ENST00000479537 ZNF57Q68EA5 555 aaPredicted RBP4.26□□□□□ -1.73
BRAF-203ENST00000479537 CCBE1Q6UXH8 406 aaPredicted RBP4.26□□□□□ -1.73
BRAF-203ENST00000479537 GCNT7Q6ZNI0 430 aa4.26□□□□□ -1.73
BRAF-203ENST00000479537 Q8N9G6 341 aaPredicted RBP4.26□□□□□ -1.73
BRAF-203ENST00000479537 FBXO30Q8TB52 745 aa4.26□□□□□ -1.73
BRAF-203ENST00000479537 IL1F10Q8WWZ1 152 aa4.26□□□□□ -1.73
BRAF-203ENST00000479537 RIT2Q99578 217 aa4.26□□□□□ -1.73
BRAF-203ENST00000479537 ZSCAN5AQ9BUG6 496 aa4.26□□□□□ -1.73
BRAF-203ENST00000479537 DUSP16Q9BY84 665 aa4.26□□□□□ -1.73
BRAF-203ENST00000479537 OPN3Q9H1Y3 402 aaPredicted RBP4.26□□□□□ -1.73
BRAF-203ENST00000479537 PNO1Q9NRX1 252 aaKnown RBP4.26□□□□□ -1.73
BRAF-203ENST00000479537 EHFQ9NZC4 300 aa4.26□□□□□ -1.73
BRAF-203ENST00000479537 XPO7Q9UIA9 1087 aaKnown RBP4.26□□□□□ -1.73
BRAF-203ENST00000479537 SNED1Q8TER0 1413 aa4.26□□□□□ -1.73
BRAF-203ENST00000479537 METP08581 1390 aa4.26□□□□□ -1.73
BRAF-203ENST00000479537 PNPLA6Q8IY17 1366 aa4.26□□□□□ -1.73
BRAF-203ENST00000479537 CHD4Q14839 1912 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 C15orf38-AP3S2A0A0A6YYH1 394 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 ESYT2A0FGR8 921 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 SRRM5B3KS81 715 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 FCN1O00602 326 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 EFNA2O43921 213 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 IGF1P05019 195 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 IQCF3P0C7M6 154 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 GATA1P15976 413 aaPredicted RBP4.25□□□□□ -1.73
BRAF-203ENST00000479537 CALB2P22676 271 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 DHPSP49366 369 aaPredicted RBP4.25□□□□□ -1.73
BRAF-203ENST00000479537 ARFIP1P53367 373 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 RND3P61587 244 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 SPIBQ01892 262 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 TTC23Q5W5X9 447 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 RALGAPA1Q6GYQ0 2036 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 CASC1Q6TDU7 716 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 STAC2Q6ZMT1 411 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 VASH2Q86V25 355 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 LRRC43Q8N309 656 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 CSNK1A1LQ8N752 337 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 TRMT10AQ8TBZ6 339 aaKnown RBP4.25□□□□□ -1.73
BRAF-203ENST00000479537 RPL3LQ92901 407 aaKnown RBP4.25□□□□□ -1.73
BRAF-203ENST00000479537 CCT8L2Q96SF2 557 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 CRACR2AQ9BSW2 395 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 NXF5Q9H1B4 397 aaKnown RBP4.25□□□□□ -1.73
BRAF-203ENST00000479537 MIEF1Q9NQG6 463 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 ALG6Q9Y672 507 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 BAHCC1Q9P281 2608 aa4.25□□□□□ -1.73
BRAF-203ENST00000479537 AHDC1Q5TGY3 1603 aaPredicted RBP4.24□□□□□ -1.73
BRAF-203ENST00000479537 ABCA6Q8N139 1617 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 PZPP20742 1482 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 NKTRP30414 1462 aaKnown RBP4.24□□□□□ -1.73
BRAF-203ENST00000479537 NUP153P49790 1475 aaKnown RBP4.24□□□□□ -1.73
BRAF-203ENST00000479537 E9PLD3 99 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 GPAA1O43292 621 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 ZNF354AO60765 605 aaPredicted RBP4.24□□□□□ -1.73
BRAF-203ENST00000479537 B3GAT3O94766 335 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 LRATO95237 230 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 F10P00742 488 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 PDHBP11177 359 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 CPN1P15169 458 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 NT5EP21589 574 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 TBXA2RP21731 343 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 GLRA2P23416 452 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 HPCAL1P37235 193 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 ACTR1AP61163 376 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 PAX2Q02962 417 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 ZNF154Q13106 437 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 TGIF1Q15583 401 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 QRICH1Q2TAL8 776 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 TMEM52BQ4KMG9 183 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 PMF1Q6P1K2 205 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 OR2T3Q8NH03 318 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 SPATA3Q8NHX4 192 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 CCDC26Q8TAB7 109 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 ADAMTS16Q8TE57 1224 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 RLN3Q8WXF3 142 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 TMEM80Q96HE8 168 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 OR5B2Q96R09 309 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 OMDQ99983 421 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 TSSK1BQ9BXA7 367 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 AIPL1Q9NZN9 384 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 DPM3Q9P2X0 92 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 OARD1Q9Y530 152 aa4.24□□□□□ -1.73
BRAF-203ENST00000479537 ATP10DQ9P241 1426 aa4.23□□□□□ -1.73
BRAF-203ENST00000479537 CACNA1GO43497 2377 aa4.23□□□□□ -1.73
BRAF-203ENST00000479537 A0A087WWV3 80 aa4.23□□□□□ -1.73
BRAF-203ENST00000479537 CLRN2A0PK11 232 aa4.23□□□□□ -1.73
BRAF-203ENST00000479537 MBLAC1A4D2B0 266 aaPredicted RBP4.23□□□□□ -1.73
BRAF-203ENST00000479537 SLC17A2O00624 439 aa4.23□□□□□ -1.73
BRAF-203ENST00000479537 N4BP1O75113 896 aaKnown RBP4.23□□□□□ -1.73
BRAF-203ENST00000479537 PGK1P00558 417 aa4.23□□□□□ -1.73
BRAF-203ENST00000479537 CD55P08174 381 aa4.23□□□□□ -1.73
BRAF-203ENST00000479537 BCL3P20749 454 aa4.23□□□□□ -1.73
BRAF-203ENST00000479537 XCR1P46094 333 aa4.23□□□□□ -1.73
BRAF-203ENST00000479537 ST3GAL3Q11203 375 aa4.23□□□□□ -1.73
BRAF-203ENST00000479537 KCNJ11Q14654 390 aa4.23□□□□□ -1.73
BRAF-203ENST00000479537 TCTEX1D4Q5JR98 221 aa4.23□□□□□ -1.73
BRAF-203ENST00000479537 C10orf120Q5SQS8 335 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms