RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 UNC119BA6NIH7 251 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 RGS13O14921 159 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 LANCL1O43813 399 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 OR5F1O95221 314 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 LYPD3O95274 346 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 CHRNB1P11230 501 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 S100A1P23297 94 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 C1orf61Q13536 156 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 SUZ12Q15022 739 aaKnown RBP10.02□□□□□ -0.81
VPS52-217ENST00000478934 QPRTQ15274 297 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 NNATQ16517 81 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 ZNF57Q68EA5 555 aaPredicted RBP10.02□□□□□ -0.81
VPS52-217ENST00000478934 SDE2Q6IQ49 451 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 ZNF322Q6U7Q0 402 aaPredicted RBP10.02□□□□□ -0.81
VPS52-217ENST00000478934 PLET1Q6UQ28 207 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 RDH10Q8IZV5 341 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 ARL14Q8N4G2 192 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 RFLNBQ8N5W9 214 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 YIPF7Q8N8F6 280 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 COX18Q8N8Q8 333 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 FAM181AQ8N9Y4 354 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 OR4M2Q8NGB6 313 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 NT5CQ8TCD5 201 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 CNOT9Q92600 299 aaKnown RBP10.02□□□□□ -0.81
VPS52-217ENST00000478934 RNF170Q96K19 258 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 SERINC2Q96SA4 455 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 GABRG3Q99928 467 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 C1QTNF7Q9BXJ2 289 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 MEPEQ9NQ76 525 aaPredicted RBP10.02□□□□□ -0.81
VPS52-217ENST00000478934 CALML5Q9NZT1 146 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 H2AFY2Q9P0M6 372 aaPredicted RBP10.02□□□□□ -0.81
VPS52-217ENST00000478934 ZNF223Q9UK11 482 aaPredicted RBP10.02□□□□□ -0.81
VPS52-217ENST00000478934 HEBP2Q9Y5Z4 205 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 ALPK2Q86TB3 2170 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 DUXAA6NLW8 204 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 LRRN3E7EW58 273 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 AKR7A2O43488 359 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 PAHP00439 452 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 HTR1FP30939 366 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 TNFRSF4P43489 277 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 TSFMP43897 325 aaKnown RBP10.02□□□□□ -0.81
VPS52-217ENST00000478934 VSX2P58304 361 aaPredicted RBP10.02□□□□□ -0.81
VPS52-217ENST00000478934 SRP54P61011 504 aaKnown RBP10.02□□□□□ -0.81
VPS52-217ENST00000478934 RPS7P62081 194 aaKnown RBP10.02□□□□□ -0.81
VPS52-217ENST00000478934 E2F1Q01094 437 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 DUSP8Q13202 625 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 ERV3-1Q14264 604 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 NDUFAF6Q330K2 333 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 LCN1P1Q5VSP4 162 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 PPP2R2DQ66LE6 453 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 CD200R1LQ6Q8B3 271 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 LYPD8Q6UX82 237 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 NANOGNBQ7Z5D8 188 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 SYT9Q86SS6 491 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 NOXA1Q86UR1 476 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 KLHL36Q8N4N3 616 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 BMPERQ8N8U9 685 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 GDPD1Q8N9F7 314 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 OR10H4Q8NGA5 316 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 OR51L1Q8NGJ5 315 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 OR13C5Q8NGS8 318 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 FANK1Q8TC84 345 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 TMEM239Q8WW34 195 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 LRRN3Q9H3W5 708 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 PPP1R3EQ9H7J1 279 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 GALNT9Q9HCQ5 603 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 FAM60AQ9NP50 221 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 NPAP1Q9NZP6 1156 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 PTGFRNQ9P2B2 879 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 FAM240BA0A1B0GVZ2 78 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 TRDV1A0A1B0GX56 115 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 SNTNA6NMZ2 147 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 IMPA2O14732 288 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 ELK1P19419 428 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 SHC1P29353 583 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 IFNA8P32881 189 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 CTHP32929 405 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 MAP2K3P46734 347 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 EMDP50402 254 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 MGAT2Q10469 447 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 DSG2Q14126 1118 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 GXYLT1Q4G148 440 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 MTFR2Q6P444 385 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 Q6ZSR6 202 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 USP53Q70EK8 1073 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 OR13H1Q8NG92 308 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 FAM131CQ96AQ9 280 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 IFT27Q9BW83 186 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 ZNF350Q9GZX5 532 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 MTIF3Q9H2K0 278 aaKnown RBP10.01□□□□□ -0.81
VPS52-217ENST00000478934 PIGUQ9H490 435 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 HRASLS2Q9NWW9 162 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 NLGN3Q9NZ94 848 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 NTMQ9P121 344 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 C19orf53Q9UNZ5 99 aaPredicted RBP10.01□□□□□ -0.81
VPS52-217ENST00000478934 EXOGQ9Y2C4 368 aaKnown RBP10.01□□□□□ -0.81
VPS52-217ENST00000478934 FANCMQ8IYD8 2048 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 CDHR4A6H8M9 788 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 FAM172BPA6NC97 362 aa10.01□□□□□ -0.81
VPS52-217ENST00000478934 J3QRE1 110 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms