RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ZNF254O75437 659 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 WBP4O75554 376 aaKnown RBP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 NUDT14O95848 222 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 LGI1O95970 557 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 IGKV3-15P01624 115 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 IGHG3P01860 377 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 THY1P04216 161 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 CRYGCP07315 174 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 APRTP07741 180 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 SNRPCP09234 159 aaKnown RBP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 CPN1P15169 458 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 CYP11B1P15538 503 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 GCFC2P16383 781 aaKnown RBP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 TPSB2P20231 275 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 PRKACBP22694 351 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 UCP1P25874 307 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 CD1BP29016 333 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 NF2P35240 595 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 LONP1P36776 959 aaKnown RBP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 NUP62P37198 522 aaPredicted RBP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 STARP49675 285 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 CRYBB1P53674 252 aaPredicted RBP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 IST1P53990 364 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 MFAP2P55001 183 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 SEC61GP60059 68 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 XIAPP98170 497 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 CSTF1Q05048 431 aaKnown RBP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 BTG3Q14201 252 aaPredicted RBP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 WDR43Q15061 677 aaKnown RBP eCLIP2.99□□□□□ -1.932e-6■■■■■ 28
SMARCA1-204ENST00000478420 TPSAB1Q15661 275 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 CAMK4Q16566 473 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 ZSWIM7Q19AV6 140 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 HKDC1Q2TB90 917 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 TIMM50Q3ZCQ8 353 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 NKAIN1Q4KMZ8 207 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 SPANXN2Q5MJ10 180 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 ACER2Q5QJU3 275 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 CCDC122Q5T0U0 273 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 LIN9Q5TKA1 542 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 CWC27Q6UX04 472 aaKnown RBP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 TRPM8Q7Z2W7 1104 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 SPATA24Q86W54 205 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 KATNAL2Q8IYT4 538 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 ZNF683Q8IZ20 524 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 FBXL16Q8N461 479 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 ARFGAP2Q8N6H7 521 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 BBS1Q8NFJ9 593 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 P3H4Q92791 437 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 KIAA1143Q96AT1 154 aaPredicted RBP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 EFHD2Q96C19 240 aaPredicted RBP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 BIRC7Q96CA5 298 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 COQ2Q96H96 371 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 CHP1Q99653 195 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 CHRDL1Q9BU40 450 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 ROPN1BQ9BZX4 212 aaPredicted RBP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 SYNDIG1Q9H7V2 258 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 CYP3A43Q9HB55 503 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 SGK2Q9HBY8 427 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 RAB18Q9NP72 206 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 SENP1Q9P0U3 644 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 ABCD2Q9UBJ2 740 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 SEC14L3Q9UDX4 400 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 PISDQ9UG56 409 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 EMCNQ9ULC0 261 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 PACSIN2Q9UNF0 486 aaPredicted RBP2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 GMEB1Q9Y692 573 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 POGZQ7Z3K3 1410 aa2.99□□□□□ -1.93
SMARCA1-204ENST00000478420 OR6C74A6NCV1 312 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 HSBP1L1C9JCN9 74 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 CYB561D2O14569 222 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 ARPC1BO15143 372 aaKnown RBP2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 CFLARO15519 480 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 RNF13O43567 381 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 LCMT2O60294 686 aaKnown RBP2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 UPK3AO75631 287 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 FGFR1OPO95684 399 aaKnown RBP2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 NDUFB10O96000 172 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 KRT14P02533 472 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 CCDC172P0C7W6 258 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 MX1P20591 662 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 NMT1P30419 496 aaKnown RBP2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 HMGCLP35914 325 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 ARHGDIAP52565 204 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 PPIAP62937 165 aaKnown RBP2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 ENPEPQ07075 957 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 FGL1Q08830 312 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 NCBP1Q09161 790 aaKnown RBP2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 PJVKQ0ZLH3 352 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 LTB4RQ15722 352 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 MAPK6Q16659 721 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 DCAF4L1Q3SXM0 396 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 HIKESHIQ53FT3 197 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 AGBL2Q5U5Z8 902 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 MARC1Q5VT66 337 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 FAM219BQ5XKK7 198 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 C16orf62Q7Z3J2 963 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 SLC22A16Q86VW1 577 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 ZBED8Q8IZ13 594 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 GPR137CQ8N3F9 429 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms