RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 YIPF6Q96EC8 236 aa7.32□□□□□ -1.24
VMA21-203ENST00000477649 PLEKHA8Q96JA3 519 aa7.32□□□□□ -1.24
VMA21-203ENST00000477649 GFM1Q96RP9 751 aaKnown RBP7.32□□□□□ -1.24
VMA21-203ENST00000477649 PRSS27Q9BQR3 290 aa7.32□□□□□ -1.24
VMA21-203ENST00000477649 FUNDC2Q9BWH2 189 aa7.32□□□□□ -1.24
VMA21-203ENST00000477649 SIAEQ9HAT2 523 aa7.32□□□□□ -1.24
VMA21-203ENST00000477649 ISYNA1Q9NPH2 558 aa7.32□□□□□ -1.24
VMA21-203ENST00000477649 C11orf16Q9NQ32 467 aa7.32□□□□□ -1.24
VMA21-203ENST00000477649 PNO1Q9NRX1 252 aaKnown RBP7.32□□□□□ -1.24
VMA21-203ENST00000477649 TBC1D23Q9NUY8 699 aa7.32□□□□□ -1.24
VMA21-203ENST00000477649 WDR70Q9NW82 654 aa7.32□□□□□ -1.24
VMA21-203ENST00000477649 CHCHD3Q9NX63 227 aaKnown RBP7.32□□□□□ -1.24
VMA21-203ENST00000477649 SIDT1Q9NXL6 827 aaKnown RBP7.32□□□□□ -1.24
VMA21-203ENST00000477649 TVP23BQ9NYZ1 205 aa7.32□□□□□ -1.24
VMA21-203ENST00000477649 DHCR7Q9UBM7 475 aaKnown RBP7.32□□□□□ -1.24
VMA21-203ENST00000477649 KCNE5Q9UJ90 142 aa7.32□□□□□ -1.24
VMA21-203ENST00000477649 ZNF223Q9UK11 482 aaPredicted RBP7.32□□□□□ -1.24
VMA21-203ENST00000477649 U3KQA8 63 aa7.32□□□□□ -1.24
VMA21-203ENST00000477649 A0A1B0GWA3 101 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 A0A1W2PQM1 296 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 VSTM2BA6NLU5 285 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 KDM4EB2RXH2 506 aaPredicted RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 C3orf80F5H4A9 247 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 NTN3O00634 580 aaPredicted RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 FLRT2O43155 660 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 FRS3O43559 492 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 TLX2O43763 284 aaPredicted RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 MAN1A2O60476 641 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 CPNE3O75131 537 aaKnown RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 ENTPD6O75354 484 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 SCRG1O75711 98 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 INMTO95050 263 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 LYPD3O95274 346 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 SOX14O95416 240 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 FADS2O95864 444 aaKnown RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 BCL10O95999 233 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 PDGFBP01127 241 aaPredicted RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 HEXBP07686 556 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 ZGLP1P0C6A0 271 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 UBL4AP11441 157 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 SNRPBP14678 240 aaKnown RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 MYL12AP19105 171 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 PSMB9P28065 219 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 HTR2AP28223 471 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 IL12BP29460 328 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 PEX19P40855 299 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 ACAA2P42765 397 aaKnown RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 GP2P55259 537 aaKnown RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 NRG3P56975 720 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 SRSF5Q13243 272 aaKnown RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 EBPQ15125 230 aaKnown RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 TIGD6Q17RP2 521 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 ISXQ2M1V0 245 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 PGGHGQ32M88 737 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 NKAIN1Q4KMZ8 207 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 SYT14P1Q58G82 188 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 ALG10BQ5I7T1 473 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 C3orf38Q5JPI3 329 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 PERM1Q5SV97 790 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 NXNL2Q5VZ03 156 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 TMEM236Q5W0B7 351 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 LAIR1Q6GTX8 287 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 WBP2NLQ6ICG8 309 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 C5orf46Q6UWT4 87 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 LINC00114Q6XXX2 140 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 CCDC81Q6ZN84 652 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 DBX2Q6ZNG2 339 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 Q6ZPB1 254 aaPredicted RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 RTL4Q6ZR62 310 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 CROCCP3Q8IVE0 287 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 SLC34A3Q8N130 599 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 LNX2Q8N448 690 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 METTL27Q8N6F8 245 aaPredicted RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 TCEANCQ8N8B7 351 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 POGLUT1Q8NBL1 392 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 OR9Q1Q8NGQ5 310 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 NUBPLQ8TB37 319 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 STT3BQ8TCJ2 826 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 TMEM255BQ8WV15 326 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 CNOT9Q92600 299 aaKnown RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 UBE2FQ969M7 185 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 BPIFA2Q96DR5 249 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 CLIP3Q96DZ5 547 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 FAM46AQ96IP4 442 aaKnown RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 LRR1Q96L50 414 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 CCDC74BQ96LY2 380 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 OR6C1Q96RD1 312 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 TMEM43Q9BTV4 400 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 MND1Q9BWT6 205 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 JAM3Q9BX67 310 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 TSSK6Q9BXA6 273 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 SEMA4CQ9C0C4 833 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 OR8D2Q9GZM6 311 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 VN1R1Q9GZP7 353 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 LAT2Q9GZY6 243 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 WDR54Q9H977 334 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 FGF20Q9NP95 211 aaPredicted RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 FBXO34Q9NWN3 711 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 H2AFY2Q9P0M6 372 aaPredicted RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 SEC14L4Q9UDX3 406 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms