RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 FAM220BPB1ANY3 271 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 M0QZK8 103 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 LDLRAD4O15165 306 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 RRP8O43159 456 aaKnown RBP11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 HSPA12AO43301 675 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 SYPP08247 313 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 PIRTP0C851 137 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 PRPS2P11908 318 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 NQO2P16083 231 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 LPOP22079 712 aaPredicted RBP11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 CERS1P27544 350 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 SOX3P41225 446 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 ZNF140P52738 457 aaPredicted RBP11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 C1DQ13901 141 aaKnown RBP11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 SLC9A5Q14940 896 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 PAPD4Q6PIY7 484 aaKnown RBP11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 LRRC28Q86X40 367 aaPredicted RBP11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 MFSD6LQ8IWD5 586 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 FAM71CQ8NEG0 241 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 FIBINQ8TAL6 211 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 ALG14Q96F25 216 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 TAS2R16Q9NYV7 291 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 PIPOXQ9P0Z9 390 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 LHX3Q9UBR4 397 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 GSTK1Q9Y2Q3 226 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 MTCL1Q9Y4B5 1905 aaKnown RBP11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 CXorf51AA0A1B0GTR3 108 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 A0A1W2PPE3 182 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 GFYI3L273 518 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 CCL22O00626 93 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 ADAM10O14672 748 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 CD160O95971 181 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 AK1P00568 194 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 HOXB5P09067 269 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 C6P13671 934 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 HOXA5P20719 270 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 CDX1P47902 265 aaPredicted RBP11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 NPBWR1P48145 328 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 HTR4Q13639 388 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 ZNF460Q14592 562 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 GPR153Q6NV75 609 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 CAMKMTQ7Z624 323 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 ZNF248Q8NDW4 579 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 CPEB3Q8NE35 698 aaKnown RBP11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 OR13C4Q8NGS5 318 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 ACOT12Q8WYK0 555 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 HIST1H2BAQ96A08 127 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 MALSU1Q96EH3 234 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 PHYHIPLQ96FC7 376 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 NOL4LQ96MY1 436 aaPredicted RBP11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 NDUFAF3Q9BU61 184 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 MENTQ9BUN1 341 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 CACNG6Q9BXT2 260 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 SLC46A2Q9BY10 475 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 REEP1Q9H902 201 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 CTPS2Q9NRF8 586 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 MARCH4Q9P2E8 410 aaPredicted RBP11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 RPS6KB2Q9UBS0 482 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 GIMAP2Q9UG22 337 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 FBXL3Q9UKT7 428 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 SLC22A14Q9Y267 594 aa11.82□□□□□ -0.52
RTFDC1-207ENST00000477573 OR2M5A3KFT3 312 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 HIDE1A8MVS5 230 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 SMAD6O43541 496 aaKnown RBP11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 OR10H2O60403 315 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 CSNK1DP48730 415 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 STC1P52823 247 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 MRPS11P82912 194 aaKnown RBP11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 CSHL1Q14406 222 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 USP39Q53GS9 565 aaKnown RBP11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 ZNF789Q5FWF6 425 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 ZCCHC12Q6PEW1 402 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 OR4K2Q8NGD2 314 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 OR10A6Q8NH74 314 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 GNPDA2Q8TDQ7 276 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 TAAR9Q96RI9 348 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 EPYCQ99645 322 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 POPDC3Q9HBV1 291 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 GAR1Q9NY12 217 aaKnown RBP11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 ZMYM5Q9UJ78 669 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 FCF1Q9Y324 198 aaKnown RBP11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 NEUROG3Q9Y4Z2 214 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 ANKRD36A6QL64 1941 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 OR51F1A6NGY5 319 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 PRR23D1E9PI22 279 aaPredicted RBP11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 CASKO14936 926 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 CSO75390 466 aaKnown RBP11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 ALPIP09923 528 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 GKN3PP0CG01 181 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 PRR23D2P0DMB1 279 aaPredicted RBP11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 ZNF25P17030 456 aaPredicted RBP11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 BPIP17213 487 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 S1PR1P21453 382 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 MPGP29372 298 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 SH3BP2P78314 561 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 DYRK1AQ13627 763 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 EML3Q32P44 896 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 NDUFAF6Q330K2 333 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 ZNF648Q5T619 568 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms