RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 CLCA1A8K7I4 914 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 NPIPB9F8W1W9 429 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 H0Y3Z8 333 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 GYG2O15488 501 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 TGM6O95932 706 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 ACTL6AO96019 429 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 CPN1P15169 458 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 ZNF708P17019 499 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 IGFBP2P18065 325 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 MATN1P21941 496 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 BMP5P22003 454 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 PPIBP23284 216 aaKnown RBP15.94■□□□□ 0.14
PTPN7-209ENST00000477554 CPOXP36551 454 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 PSMD4P55036 377 aaKnown RBP15.94■□□□□ 0.14
PTPN7-209ENST00000477554 SLC25A3Q00325 362 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 RAET1LQ5VY80 246 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 NSUN5P2Q63ZY6 315 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 POC1BQ8TC44 478 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 ADAMTS15Q8TE58 950 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 ASB5Q8WWX0 329 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 SLC35G5Q96KT7 338 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 ANKRD27Q96NW4 1050 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 SLC35A5Q9BS91 424 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 ENKD1Q9H0I2 346 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 MRTO4Q9UKD2 239 aaKnown RBP15.94■□□□□ 0.14
PTPN7-209ENST00000477554 FAF1Q9UNN5 650 aaPredicted RBP15.94■□□□□ 0.14
PTPN7-209ENST00000477554 PCDHGB3Q9Y5G1 929 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 TRBV5-3A0A0A0MS03 114 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 ERICH4A6NGS2 130 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 EVPLLA8MZ36 301 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 H3BML4 177 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 FXYD1O00168 92 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 NDUFB5O43674 189 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 TNFRSF21O75509 655 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 KRT75O95678 551 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 OR12D1P0DN82 309 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 COX6B1P14854 86 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 HOXB9P17482 250 aaPredicted RBP15.93■□□□□ 0.14
PTPN7-209ENST00000477554 MSX1P28360 303 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 ZNF117Q03924 483 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 TOMM34Q15785 309 aaPredicted RBP15.93■□□□□ 0.14
PTPN7-209ENST00000477554 TMEM44Q2T9K0 475 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 GTDC1Q4AE62 458 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 KLHL26Q53HC5 615 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 RUNDC3AQ59EK9 446 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 COX20Q5RI15 118 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 SAXO2Q658L1 398 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 NANOGP8Q6NSW7 305 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 C8orf82Q6P1X6 216 aaPredicted RBP15.93■□□□□ 0.14
PTPN7-209ENST00000477554 MEX3BQ6ZN04 569 aaKnown RBP15.93■□□□□ 0.14
PTPN7-209ENST00000477554 DEFB107AQ8IZN7 70 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 GCNT2Q8N0V5 402 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 OR8J3Q8NGG0 315 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 SMPDL3BQ92485 455 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 ZG16BQ96DA0 208 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 ZNF845Q96IR2 970 aaPredicted RBP15.93■□□□□ 0.14
PTPN7-209ENST00000477554 SDF2Q99470 211 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 GPATCH1Q9BRR8 931 aaKnown RBP15.93■□□□□ 0.14
PTPN7-209ENST00000477554 RAD21L1Q9H4I0 556 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 NANOGQ9H9S0 305 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 CHST11Q9NPF2 352 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 SLC25A37Q9NYZ2 338 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 CLCF1Q9UBD9 225 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 CORO2BQ9UQ03 480 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 AP3M1Q9Y2T2 418 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 MRPS18CQ9Y3D5 142 aaKnown RBP15.93■□□□□ 0.14
PTPN7-209ENST00000477554 GMEB1Q9Y692 573 aa15.93■□□□□ 0.14
PTPN7-209ENST00000477554 HEATR5AQ86XA9 2040 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 MBD3L4A6NDZ8 208 aaPredicted RBP15.92■□□□□ 0.14
PTPN7-209ENST00000477554 MBD3L3A6NE82 208 aaPredicted RBP15.92■□□□□ 0.14
PTPN7-209ENST00000477554 MBD3L5A6NJ08 208 aaPredicted RBP15.92■□□□□ 0.14
PTPN7-209ENST00000477554 CLIC1O00299 241 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 SEC14L5O43304 696 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 NGFRP08138 427 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 CHI3L1P36222 383 aaPredicted RBP15.92■□□□□ 0.14
PTPN7-209ENST00000477554 PSME3P61289 254 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 NCALDP61601 193 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 PLAURQ03405 335 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 C17orf67Q0P5P2 114 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 CAPRIN1Q14444 709 aaKnown RBP15.92■□□□□ 0.14
PTPN7-209ENST00000477554 MAPK14Q16539 360 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 ZNF771Q7L3S4 317 aaPredicted RBP15.92■□□□□ 0.14
PTPN7-209ENST00000477554 LACC1Q8IV20 430 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 PM20D2Q8IYS1 436 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 MBD3L2Q8NHZ7 208 aaPredicted RBP15.92■□□□□ 0.14
PTPN7-209ENST00000477554 FBXO27Q8NI29 283 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 PNPT1Q8TCS8 783 aaKnown RBP15.92■□□□□ 0.14
PTPN7-209ENST00000477554 ZPLD1Q8TCW7 415 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 ZFP90Q8TF47 636 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 TREX2Q9BQ50 279 aaPredicted RBP15.92■□□□□ 0.14
PTPN7-209ENST00000477554 SLC39A3Q9BRY0 314 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 LRMDAQ9H2I8 198 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 TPT1P8Q9HAU6 139 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 SPAG4Q9NPE6 437 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 KCNJ16Q9NPI9 418 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 UBQLN4Q9NRR5 601 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 MKLN1Q9UL63 735 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 CARD8Q9Y2G2 431 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 L3MBTL1Q9Y468 752 aa15.92■□□□□ 0.14
PTPN7-209ENST00000477554 CD8B2A6NJW9 211 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms