RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 C1QL1O75973 258 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 OR2J3O76001 311 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 KRT33AO76009 404 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 FADS2O95864 444 aaKnown RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 HPRP00739 348 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 APOHP02749 345 aaPredicted RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 RPN2P04844 631 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 SERPINB2P05120 415 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PRKCGP05129 697 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 SERPINE2P07093 398 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 UBCP0CG48 685 aaKnown RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 MYL2P10916 166 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 MBL2P11226 248 aaPredicted RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ATP1B2P14415 290 aaPredicted RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 H2AFXP16104 143 aaPredicted RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 TBXA2RP21731 343 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 CD1CP29017 333 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PRDX3P30048 256 aaKnown RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PPP2R1BP30154 601 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 HOXA7P31268 230 aaPredicted RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 CCKBRP32239 447 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 TNFSF8P32971 234 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PIGAP37287 484 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 NPBWR2P48146 333 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PCYT1AP49585 367 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 COMPP49747 757 aaPredicted RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 EFNB2P52799 333 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ATP1B3P54709 279 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PSMD4P55036 377 aaKnown RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 CLDN20P56880 219 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 RAB10P61026 200 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PPP2CBP62714 309 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PPP2CAP67775 309 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 HOXA4Q00056 320 aaPredicted RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 HSF1Q00613 529 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 IL9RQ01113 521 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 CDR2Q01850 454 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 NAAAQ02083 359 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 SP3Q02447 781 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 IRF8Q02556 426 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 FOXL1Q12952 345 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 TRAF1Q13077 416 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 STX5Q13190 355 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 SNTA1Q13424 505 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ITGA9Q13797 1035 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 GK3PQ14409 553 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ITIH4Q14624 930 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 FASTKD3Q14CZ7 662 aaKnown RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PON2Q15165 354 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 CTF1Q16619 201 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 BEAN1Q3B7T3 259 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 GGTA1PQ4G0N0 100 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 RAB6CQ53S08 254 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PAN3Q58A45 887 aaKnown RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 BEND3Q5T5X7 828 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 FAM69BQ5VUD6 431 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 SLX4IPQ5VYV7 408 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 KIAA0895LQ68EN5 471 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 FAM173BQ6P4H8 233 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 FAM171BQ6P995 826 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ULK3Q6PHR2 472 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 BHLHB9Q6PI77 547 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 TMIGD1Q6UXZ0 262 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 CEACAM20Q6UY09 585 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 TMEM184AQ6ZMB5 413 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 LEKR1Q6ZMV7 388 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 RFPL4BQ6ZWI9 263 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 SLC35D2Q76EJ3 337 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 SLC29A4Q7RTT9 530 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PID1Q7Z2X4 250 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 COX8CQ7Z4L0 72 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 NET1Q7Z628 596 aaPredicted RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ANKRD37Q7Z713 158 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 CD163Q86VB7 1156 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 C1QL4Q86Z23 238 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PLD3Q8IV08 490 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 DCUN1D3Q8IWE4 304 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 GPALPP1Q8IXQ4 340 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ELMOD1Q8N336 334 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 CCDC185Q8N715 623 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 MAB21L3Q8N8X9 362 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 MFSD9Q8NBP5 474 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 OR10A7Q8NGE5 316 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 OR4A15Q8NGL6 344 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ARRDC2Q8TBH0 407 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 RDH11Q8TC12 318 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 CD99L2Q8TCZ2 262 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 WFIKKN2Q8TEU8 576 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 FCAMRQ8WWV6 532 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 FAM3CQ92520 227 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 NAT6Q93015 286 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 NUS1Q96E22 293 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 MOCOSQ96EN8 888 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PELI1Q96FA3 418 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 FAM84BQ96KN1 310 aaPredicted RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 C3orf30Q96M34 536 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 UHRF2Q96PU4 802 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 CSPG4P5Q96PW8 444 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 OR14A2Q96R54 314 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 IL4I1Q96RQ9 567 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms