RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 FAM71CQ8NEG0 241 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 OR10Q1Q8NGQ4 319 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 FBXO27Q8NI29 283 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 FIG4Q92562 907 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 DNAJA3Q96EY1 480 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 TMEM19Q96HH6 336 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 TRNT1Q96Q11 434 aaKnown RBP11.21□□□□□ -0.61
APTX-220ENST00000476858 THUMPD3Q9BV44 507 aaKnown RBP11.21□□□□□ -0.61
APTX-220ENST00000476858 FAM107BQ9H098 131 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 KLHL14Q9P2G3 628 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 CLCF1Q9UBD9 225 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 PCDHGB3Q9Y5G1 929 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 CRYBG3Q68DQ2 2970 aa11.21□□□□□ -0.62
APTX-220ENST00000476858 ARHGAP21Q5T5U3 1957 aa11.21□□□□□ -0.62
APTX-220ENST00000476858 HEATR5AQ86XA9 2040 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 A0A0J9YW62 118 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 AGAP5A6NIR3 686 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 PRSS44E7EML9 344 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 H0Y3Z8 333 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 FXYD1O00168 92 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 GTPBP1O00178 669 aaKnown RBP11.2□□□□□ -0.62
APTX-220ENST00000476858 DYNC1I1O14576 645 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 ZNF264O43296 627 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 NTN1O95631 604 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 KRT75O95678 551 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 EPPINO95925 133 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 AK1P00568 194 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 CSTAP01040 98 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 SNRPB2P08579 225 aaKnown RBP11.2□□□□□ -0.62
APTX-220ENST00000476858 GP1BBP13224 206 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 PRG2P13727 222 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 PRKCAP17252 672 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 POU3F2P20265 443 aaPredicted RBP11.2□□□□□ -0.62
APTX-220ENST00000476858 HTR1EP28566 365 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 CEACAM8P31997 349 aaPredicted RBP11.2□□□□□ -0.62
APTX-220ENST00000476858 SLC6A8P48029 635 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 P2RX1P51575 399 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 TFF3Q07654 80 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 LRRC74AQ0VAA2 488 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 QPRTQ15274 297 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 ZNF630Q2M218 657 aaPredicted RBP11.2□□□□□ -0.62
APTX-220ENST00000476858 RUNDC3AQ59EK9 446 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 NSUN5P2Q63ZY6 315 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 ZNF836Q6ZNA1 936 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 LRRC74BQ6ZQY2 392 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 DHDDSQ86SQ9 333 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 SNX32Q86XE0 403 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 TREML1Q86YW5 311 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 GCNT2Q8N0V5 402 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 CLIP4Q8N3C7 705 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 GTPBP8Q8N3Z3 284 aaPredicted RBP11.2□□□□□ -0.62
APTX-220ENST00000476858 RELL2Q8NC24 303 aaPredicted RBP11.2□□□□□ -0.62
APTX-220ENST00000476858 NFKBIDQ8NI38 313 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 RND1Q92730 232 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 ADGRG7Q96K78 797 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 ELAC2Q9BQ52 826 aaKnown RBP11.2□□□□□ -0.62
APTX-220ENST00000476858 WFDC6Q9BQY6 131 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 SIKE1Q9BRV8 207 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 HOXD1Q9GZZ0 328 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 PTGES2Q9H7Z7 377 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 NPDC1Q9NQX5 325 aaPredicted RBP11.2□□□□□ -0.62
APTX-220ENST00000476858 DNAJB12Q9NXW2 375 aaKnown RBP11.2□□□□□ -0.62
APTX-220ENST00000476858 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.2□□□□□ -0.62
APTX-220ENST00000476858 FBN2P35556 2912 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 CELSR2Q9HCU4 2923 aa11.2□□□□□ -0.62
APTX-220ENST00000476858 ADGRG4Q8IZF6 3080 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 LOC100653049A0A140TA62 436 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 AHRRA9YTQ3 701 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 FRS3O43559 492 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 DNAJA2O60884 412 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 GCM2O75603 506 aaPredicted RBP11.19□□□□□ -0.62
APTX-220ENST00000476858 KRT34O76011 436 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 CLDN14O95500 239 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 NUDT14O95848 222 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 GKN3PP0CG01 181 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 BMP2P12643 396 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 MSX1P28360 303 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 LSP1P33241 339 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 RYKP34925 604 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 HOXC5Q00444 222 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 GANABQ14697 944 aaKnown RBP11.19□□□□□ -0.62
APTX-220ENST00000476858 GLIPR1L2Q4G1C9 344 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 RABL3Q5HYI8 236 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 MRPL2Q5T653 305 aaKnown RBP11.19□□□□□ -0.62
APTX-220ENST00000476858 METTL21CQ5VZV1 264 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 REP15Q6BDI9 236 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 MTERF4Q7Z6M4 381 aaKnown RBP11.19□□□□□ -0.62
APTX-220ENST00000476858 PTOV1Q86YD1 416 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 DPP10Q8N608 796 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 ZNF527Q8NB42 609 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 ATP6V1C2Q8NEY4 427 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 OR5W2Q8NH69 310 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 ZPLD1Q8TCW7 415 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 CGREF1Q99674 301 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 TREX2Q9BQ50 279 aaPredicted RBP11.19□□□□□ -0.62
APTX-220ENST00000476858 LAT2Q9GZY6 243 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 A4GALTQ9NPC4 353 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 LEF1Q9UJU2 399 aaPredicted RBP11.19□□□□□ -0.62
APTX-220ENST00000476858 TRIM33Q9UPN9 1127 aa11.19□□□□□ -0.62
APTX-220ENST00000476858 NDUFAF1Q9Y375 327 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms