RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CBLN3Q6UW01 205 aa26.42■■□□□ 1.82
VEGFA-211ENST00000476772 LSRQ86X29 649 aaPredicted RBP26.42■■□□□ 1.82
VEGFA-211ENST00000476772 ADAMTS17Q8TE56 1095 aa26.42■■□□□ 1.82
VEGFA-211ENST00000476772 ZNF556Q9HAH1 456 aa26.42■■□□□ 1.82
VEGFA-211ENST00000476772 EXOSC3Q9NQT5 275 aaKnown RBP26.42■■□□□ 1.82
VEGFA-211ENST00000476772 PAPOLBQ9NRJ5 636 aaKnown RBP26.42■■□□□ 1.82
VEGFA-211ENST00000476772 H0YAE9 185 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 NDUFB5O43674 189 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 SCO2O43819 266 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 MAN1A2O60476 641 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 FBXO45P0C2W1 286 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 ICAM2P13598 275 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 ATP1A4Q13733 1029 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 PDK3Q15120 406 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 ZNF613Q6PF04 617 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 SLC15A4Q8N697 577 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 TMCO5AQ8N6Q1 288 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 GRHL3Q8TE85 626 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 PRSS27Q9BQR3 290 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 TRIM2Q9C040 744 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 GPN2Q9H9Y4 310 aaPredicted RBP26.41■■□□□ 1.82
VEGFA-211ENST00000476772 UBAP1Q9NZ09 502 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 POFUT2Q9Y2G5 429 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 PCDHGB5Q9Y5G0 923 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 PTPRZ1P23471 2315 aaPredicted RBP26.41■■□□□ 1.82
VEGFA-211ENST00000476772 A0A1B0GWA3 101 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 C17orf51A8MQB3 221 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 ANGPTL1O95841 491 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 CDH2P19022 906 aaPredicted RBP26.41■■□□□ 1.82
VEGFA-211ENST00000476772 NUP54Q7Z3B4 507 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 LSMEM1Q8N8F7 131 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 TMEM255BQ8WV15 326 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 TMCO6Q96DC7 493 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 CDCP1Q9H5V8 836 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 MGAT4BQ9UQ53 548 aa26.41■■□□□ 1.82
VEGFA-211ENST00000476772 HEATR5AQ86XA9 2040 aa26.4■■□□□ 1.82
VEGFA-211ENST00000476772 A0A0B4J2E0 115 aa26.4■■□□□ 1.82
VEGFA-211ENST00000476772 A0A1B0GX12 115 aa26.4■■□□□ 1.82
VEGFA-211ENST00000476772 DXOO77932 396 aaKnown RBP26.4■■□□□ 1.82
VEGFA-211ENST00000476772 ADAP00813 363 aa26.4■■□□□ 1.82
VEGFA-211ENST00000476772 CCR4P51679 360 aa26.4■■□□□ 1.82
VEGFA-211ENST00000476772 ZNF117Q03924 483 aa26.4■■□□□ 1.82
VEGFA-211ENST00000476772 CAMK2BQ13554 666 aa26.4■■□□□ 1.82
VEGFA-211ENST00000476772 ZNF730Q6ZMV8 503 aa26.4■■□□□ 1.82
VEGFA-211ENST00000476772 WDR88Q6ZMY6 472 aa26.4■■□□□ 1.82
VEGFA-211ENST00000476772 APLFQ8IW19 511 aaPredicted RBP26.4■■□□□ 1.82
VEGFA-211ENST00000476772 CADM2Q8N3J6 435 aa26.4■■□□□ 1.82
VEGFA-211ENST00000476772 LINC00471Q8N535 108 aa26.4■■□□□ 1.82
VEGFA-211ENST00000476772 ZNF555Q8NEP9 628 aa26.4■■□□□ 1.82
VEGFA-211ENST00000476772 RNF217Q8TC41 542 aa26.4■■□□□ 1.82
VEGFA-211ENST00000476772 ACOT11Q8WXI4 607 aaPredicted RBP26.4■■□□□ 1.82
VEGFA-211ENST00000476772 SH3YL1Q96HL8 342 aaPredicted RBP26.4■■□□□ 1.82
VEGFA-211ENST00000476772 LAT2Q9GZY6 243 aa26.4■■□□□ 1.82
VEGFA-211ENST00000476772 ADAM10O14672 748 aa26.39■■□□□ 1.82
VEGFA-211ENST00000476772 SOX3P41225 446 aa26.39■■□□□ 1.82
VEGFA-211ENST00000476772 ST13P50502 369 aaKnown RBP26.39■■□□□ 1.82
VEGFA-211ENST00000476772 TOR1AIP2Q8NFQ8 470 aa26.39■■□□□ 1.82
VEGFA-211ENST00000476772 TTC9Q92623 222 aa26.39■■□□□ 1.82
VEGFA-211ENST00000476772 SPACA9Q96E40 222 aaPredicted RBP26.39■■□□□ 1.82
VEGFA-211ENST00000476772 DCDC2BA2VCK2 349 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 HCRTR2O43614 444 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 LINGO3P0C6S8 592 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 LIPCP11150 499 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 PTNP21246 168 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 UGT2B15P54855 530 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 NTRK2Q16620 822 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 TTC23Q5W5X9 447 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 USP51Q70EK9 711 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 ZER1Q7Z7L7 766 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 RPS19BP1Q86WX3 136 aaKnown RBP26.38■■□□□ 1.81
VEGFA-211ENST00000476772 OR10G3Q8NGC4 313 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 KIAA1143Q96AT1 154 aaPredicted RBP26.38■■□□□ 1.81
VEGFA-211ENST00000476772 DGCR6LQ9BY27 220 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 GABARAPL3Q9BY60 117 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 YARS2Q9Y2Z4 477 aaKnown RBP26.38■■□□□ 1.81
VEGFA-211ENST00000476772 OR6B1O95007 311 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 SLC34A2O95436 690 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 MYF6P23409 242 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 MLF1P58340 268 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 CHAF1BQ13112 559 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 KLHL17Q6TDP4 642 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 RNF138Q8WVD3 245 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 KLHDC3Q9BQ90 382 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 GRIP2Q9C0E4 1043 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 WDR70Q9NW82 654 aa26.38■■□□□ 1.81
VEGFA-211ENST00000476772 LOC100130705A0A1B0GUX0 176 aa26.37■■□□□ 1.81
VEGFA-211ENST00000476772 CHP2O43745 196 aa26.37■■□□□ 1.81
VEGFA-211ENST00000476772 SERPINA7P05543 415 aa26.37■■□□□ 1.81
VEGFA-211ENST00000476772 LIFP15018 202 aa26.37■■□□□ 1.81
VEGFA-211ENST00000476772 ENDOUP21128 410 aaKnown RBP26.37■■□□□ 1.81
VEGFA-211ENST00000476772 EPHA2P29317 976 aa26.37■■□□□ 1.81
VEGFA-211ENST00000476772 COPZ1P61923 177 aa26.37■■□□□ 1.81
VEGFA-211ENST00000476772 NPRL3Q12980 569 aa26.37■■□□□ 1.81
VEGFA-211ENST00000476772 ZNF791Q3KP31 576 aaPredicted RBP26.37■■□□□ 1.81
VEGFA-211ENST00000476772 ALG10BQ5I7T1 473 aa26.37■■□□□ 1.81
VEGFA-211ENST00000476772 RRM2BQ7LG56 351 aa26.37■■□□□ 1.81
VEGFA-211ENST00000476772 PRICKLE2Q7Z3G6 844 aa26.37■■□□□ 1.81
VEGFA-211ENST00000476772 ARMC10Q8N2F6 343 aa26.37■■□□□ 1.81
VEGFA-211ENST00000476772 RPS6KB2Q9UBS0 482 aa26.37■■□□□ 1.81
VEGFA-211ENST00000476772 SLC16A6O15403 523 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms