RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 EVA1BQ9NVM1 165 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 SIT1Q9Y3P8 196 aa15.24■□□□□ 0.03
TMEM53-208ENST00000476724 TP53BP1Q12888 1972 aaPredicted RBP15.24■□□□□ 0.03
TMEM53-208ENST00000476724 FAM86C2PA6NEL3 165 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 CASKO14936 926 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 NKX2-2O95096 273 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 LYPD3O95274 346 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 ZGLP1P0C6A0 271 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 SLC35E2P0CK97 266 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 IFI30P13284 250 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 PRG2P13727 222 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 PVRP15151 417 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 GABRA3P34903 492 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 TGM4P49221 684 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 BAK1Q16611 211 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 PDZK1Q5T2W1 519 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 ZNF544Q6NX49 715 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 ZNF322Q6U7Q0 402 aaPredicted RBP15.23■□□□□ 0.03
TMEM53-208ENST00000476724 NCCRP1Q6ZVX7 275 aaPredicted RBP15.23■□□□□ 0.03
TMEM53-208ENST00000476724 MEPCEQ7L2J0 689 aaKnown RBP15.23■□□□□ 0.03
TMEM53-208ENST00000476724 PRSS41Q7RTY9 318 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 TMEFF1Q8IYR6 380 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 CAMKK1Q8N5S9 505 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 ARIH2OSQ8N7S6 290 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 TMEM52Q8NDY8 209 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 CADM4Q8NFZ8 388 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 SPRYD4Q8WW59 207 aaPredicted RBP15.23■□□□□ 0.03
TMEM53-208ENST00000476724 HSPA12BQ96MM6 686 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 KCNE5Q9UJ90 142 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 MED31Q9Y3C7 131 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 PEX12O00623 359 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 BHLHE40O14503 412 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 SLC2A10O95528 541 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 GKN3PP0CG01 181 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 CELP19835 753 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 DRD5P21918 477 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 CD79BP40259 229 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 CTBP2P56545 445 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 OR2B6P58173 313 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 ASAH1Q13510 395 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 AMZ1Q400G9 498 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 ZMAT1Q5H9K5 638 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 GARNL3Q5VVW2 1013 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 METAP1DQ6UB28 335 aaPredicted RBP15.23■□□□□ 0.03
TMEM53-208ENST00000476724 BMP8AQ7Z5Y6 402 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 NRARPQ7Z6K4 114 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 SLC43A2Q8N370 569 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 ACBD7Q8N6N7 88 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 BBS1Q8NFJ9 593 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 DNAJA4Q8WW22 397 aaPredicted RBP15.23■□□□□ 0.03
TMEM53-208ENST00000476724 ANKRD9Q96BM1 317 aaPredicted RBP15.23■□□□□ 0.03
TMEM53-208ENST00000476724 CCDC3Q9BQI4 270 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 MOV10Q9HCE1 1003 aaKnown RBP15.23■□□□□ 0.03
TMEM53-208ENST00000476724 INPP5EQ9NRR6 644 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 IL20RAQ9UHF4 553 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 BAIAP2Q9UQB8 552 aa15.23■□□□□ 0.03
TMEM53-208ENST00000476724 MYO15AQ9UKN7 3530 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 SPAG17Q6Q759 2223 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 SOCS6O14544 535 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 TMCC2O75069 709 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 LALBAP00709 142 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 MAKP20794 623 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 TBXA2RP21731 343 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 PTBP1P26599 531 aaKnown RBP eCLIP15.22■□□□□ 0.03
TMEM53-208ENST00000476724 CXCL12P48061 93 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 NIPAL3Q6P499 406 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 WDR88Q6ZMY6 472 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 RAB43Q86YS6 212 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 GRAMD2AQ8IUY3 354 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 UBALD2Q8IYN6 164 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 UBQLNLQ8IYU4 475 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 CELF2-AS1Q8N7Q2 184 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 OR5T3Q8NGG3 340 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 BPIFA2Q96DR5 249 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 TIGARQ9NQ88 270 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 FBXO34Q9NWN3 711 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 SCN2AQ99250 2005 aa15.22■□□□□ 0.03
TMEM53-208ENST00000476724 SDK1Q7Z5N4 2213 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 CACNA1IQ9P0X4 2223 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 B4DGG1 531 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 GABRPO00591 440 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 POLR1CO15160 346 aaPredicted RBP15.21■□□□□ 0.03
TMEM53-208ENST00000476724 PDGFBP01127 241 aaPredicted RBP15.21■□□□□ 0.03
TMEM53-208ENST00000476724 BLKP51451 505 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 VSX2P58304 361 aaPredicted RBP15.21■□□□□ 0.03
TMEM53-208ENST00000476724 FXYD6P3P58550 94 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 EXOSC7Q15024 291 aaKnown RBP15.21■□□□□ 0.03
TMEM53-208ENST00000476724 ZSWIM7Q19AV6 140 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 ARMC6Q6NXE6 501 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 PLBD1Q6P4A8 553 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 MZT2AQ6P582 158 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 FIGNL1Q6PIW4 674 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 SMARCD3Q6STE5 483 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 ZFP41Q8N8Y5 198 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 ATP6V1C2Q8NEY4 427 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 ZDHHC1Q8WTX9 485 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 SLC22A4Q9H015 551 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 CMC2Q9NRP2 79 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 A0A1W2PQ09 198 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms