RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 PPCSQ9HAB8 311 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 BCO1Q9HAY6 547 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 MKS1Q9NXB0 559 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 GIMAP2Q9UG22 337 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 LAMP3Q9UQV4 416 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 FIS1Q9Y3D6 152 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 RNF115Q9Y4L5 304 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 KCNE3Q9Y6H6 103 aa11.65□□□□□ -0.54
MRPL55-228ENST00000476267 UQCRHLA0A096LP55 91 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 NPIPA5A0A0B4J1W7 369 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 NPIPA7E9PJI5 369 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 KIF2AO00139 706 aaPredicted RBP11.64□□□□□ -0.55
MRPL55-228ENST00000476267 COPEO14579 308 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 ZNF195O14628 629 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 PIP5K1BO14986 540 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 TRIM13O60858 407 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 DNAJA2O60884 412 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 CRLF1O75462 422 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 PABPC4LP0CB38 370 aaKnown RBP11.64□□□□□ -0.55
MRPL55-228ENST00000476267 NPIPA8P0DM63 369 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 LAMP1P11279 417 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 KRT4P19013 534 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 EDNRAP25101 427 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 ARRB2P32121 409 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 PPP2R2BQ00005 443 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 NDUFAF6Q330K2 333 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 GALNTL6Q49A17 601 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 TMEM201Q5SNT2 666 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 DCST2Q5T1A1 773 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 FCRLAQ7L513 359 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 R3HCC1LQ7Z5L2 792 aaKnown RBP11.64□□□□□ -0.55
MRPL55-228ENST00000476267 C4orf33Q8N1A6 199 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 EIF1ADQ8N9N8 165 aaKnown RBP11.64□□□□□ -0.55
MRPL55-228ENST00000476267 LRRN4CLQ8ND94 238 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 PHOSPHO1Q8TCT1 267 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 ZFP90Q8TF47 636 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 JADE3Q92613 823 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 NEUROG1Q92886 237 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 FBXW5Q969U6 566 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 PSD2Q9BQI7 771 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 ACTRT3Q9BYD9 372 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 CARD8Q9Y2G2 431 aa11.64□□□□□ -0.55
MRPL55-228ENST00000476267 MAGED1Q9Y5V3 778 aaPredicted RBP11.64□□□□□ -0.55
MRPL55-228ENST00000476267 GPC6Q9Y625 555 aaPredicted RBP11.64□□□□□ -0.55
MRPL55-228ENST00000476267 NPHS1O60500 1241 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 PRKD3O94806 890 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 ADAP00813 363 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 YES1P07947 543 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 ENPP1P22413 925 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 RNF144AP50876 292 aaPredicted RBP11.63□□□□□ -0.55
MRPL55-228ENST00000476267 ATP12AP54707 1039 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 SELENBP1Q13228 472 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 PTGR1Q14914 329 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 P2RY6Q15077 328 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 ETFDHQ16134 617 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 CLEC12BQ2HXU8 276 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 PGGHGQ32M88 737 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 ZNF672Q499Z4 452 aaPredicted RBP11.63□□□□□ -0.55
MRPL55-228ENST00000476267 Q6ZT83 130 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 CXXC5Q7LFL8 322 aaKnown RBP11.63□□□□□ -0.55
MRPL55-228ENST00000476267 RIMKLAQ8IXN7 391 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 BANPQ8N9N5 519 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 CCDC63Q8NA47 563 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 KBTBD8Q8NFY9 601 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 PIWIL2Q8TC59 973 aaKnown RBP11.63□□□□□ -0.55
MRPL55-228ENST00000476267 OR5P2Q8WZ92 322 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 HSD17B8Q92506 261 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 COQ8BQ96D53 544 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 MRGPRX4Q96LA9 322 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 C3orf30Q96M34 536 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 TACO1Q9BSH4 297 aaKnown RBP11.63□□□□□ -0.55
MRPL55-228ENST00000476267 POTEKPQ9BYX7 375 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 TRIM2Q9C040 744 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 HOXD1Q9GZZ0 328 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 TIGARQ9NQ88 270 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 MID2Q9UJV3 735 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 TRAF6Q9Y4K3 522 aa11.63□□□□□ -0.55
MRPL55-228ENST00000476267 CHD3Q12873 2000 aaKnown RBP11.63□□□□□ -0.55
MRPL55-228ENST00000476267 IGHV3-15A0A0B4J1V0 119 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 GOLGA8QA0A0J9YX86 632 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 GOLGA8OA6NCC3 632 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 DPRXA6NFQ7 191 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 GJE1A6NN92 205 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 RNF223E7ERA6 249 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 GOLGA8NF8WBI6 632 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 SMAD9O15198 467 aaKnown RBP11.62□□□□□ -0.55
MRPL55-228ENST00000476267 CHEK2O96017 543 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 CD8AP01732 235 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 IGHV4-39P01824 125 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 CD3EP07766 207 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 COX5AP20674 150 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 ALDH3A1P30838 453 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 HPCAL1P37235 193 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 CDKN1AP38936 164 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 OR3A2P47893 321 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 CCT3P49368 545 aaKnown RBP11.62□□□□□ -0.55
MRPL55-228ENST00000476267 RAC3P60763 192 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 BSPH1Q075Z2 132 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 ITGADQ13349 1161 aa11.62□□□□□ -0.55
MRPL55-228ENST00000476267 TMEM176BQ3YBM2 270 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms