RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 TSEN54Q7Z6J9 526 aaKnown RBP11.24□□□□□ -0.61
MRPL55-227ENST00000475832 TMEM179BQ7Z7N9 219 aa11.24□□□□□ -0.61
MRPL55-227ENST00000475832 TMCO5AQ8N6Q1 288 aa11.24□□□□□ -0.61
MRPL55-227ENST00000475832 ZSCAN1Q8NBB4 408 aa11.24□□□□□ -0.61
MRPL55-227ENST00000475832 OR4C3Q8NH37 302 aa11.24□□□□□ -0.61
MRPL55-227ENST00000475832 RNF217Q8TC41 542 aa11.24□□□□□ -0.61
MRPL55-227ENST00000475832 ADAMTS16Q8TE57 1224 aa11.24□□□□□ -0.61
MRPL55-227ENST00000475832 THAP3Q8WTV1 239 aaPredicted RBP11.24□□□□□ -0.61
MRPL55-227ENST00000475832 CNOT9Q92600 299 aaKnown RBP11.24□□□□□ -0.61
MRPL55-227ENST00000475832 TTC9Q92623 222 aa11.24□□□□□ -0.61
MRPL55-227ENST00000475832 FGF11Q92914 225 aa11.24□□□□□ -0.61
MRPL55-227ENST00000475832 SLC41A3Q96GZ6 507 aa11.24□□□□□ -0.61
MRPL55-227ENST00000475832 PSD2Q9BQI7 771 aa11.24□□□□□ -0.61
MRPL55-227ENST00000475832 ZBTB20Q9HC78 741 aaPredicted RBP11.24□□□□□ -0.61
MRPL55-227ENST00000475832 EXOSC3Q9NQT5 275 aaKnown RBP11.24□□□□□ -0.61
MRPL55-227ENST00000475832 PAPOLBQ9NRJ5 636 aaKnown RBP11.24□□□□□ -0.61
MRPL55-227ENST00000475832 SDHAF3Q9NRP4 125 aa11.24□□□□□ -0.61
MRPL55-227ENST00000475832 DNAJB12Q9NXW2 375 aaKnown RBP11.24□□□□□ -0.61
MRPL55-227ENST00000475832 ZNF223Q9UK11 482 aaPredicted RBP11.24□□□□□ -0.61
MRPL55-227ENST00000475832 YARS2Q9Y2Z4 477 aaKnown RBP11.24□□□□□ -0.61
MRPL55-227ENST00000475832 PCDHGA6Q9Y5G7 932 aa11.24□□□□□ -0.61
MRPL55-227ENST00000475832 KIF26BQ2KJY2 2108 aa11.24□□□□□ -0.61
MRPL55-227ENST00000475832 C7orf72A4D263 438 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 ALG1L2C9J202 215 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 FFAR1O14842 300 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 PRKNO60260 465 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-227ENST00000475832 ICOSLGO75144 302 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 ADAP00813 363 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 SERPINA7P05543 415 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 LINGO3P0C6S8 592 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 LIPCP11150 499 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 EIF2S3P41091 472 aaKnown RBP11.23□□□□□ -0.61
MRPL55-227ENST00000475832 LIMS1P48059 325 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 FOXD4Q12950 439 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-227ENST00000475832 OR1Q1Q15612 314 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 NHSL2Q5HYW2 709 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 FAM69BQ5VUD6 431 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 KDM4DQ6B0I6 523 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 JMJD6Q6NYC1 403 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-227ENST00000475832 FAHD1Q6P587 224 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 ZNF730Q6ZMV8 503 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 COMTD1Q86VU5 262 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 CDK20Q8IZL9 346 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 HS3ST5Q8IZT8 346 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 AQP11Q8NBQ7 271 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 PIGXQ8TBF5 258 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 ACOT11Q8WXI4 607 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-227ENST00000475832 NKD1Q969G9 470 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 HS6ST2Q96MM7 605 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 NR1H4Q96RI1 486 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-227ENST00000475832 LMF1Q96S06 567 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 FEVQ99581 238 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 CTPS2Q9NRF8 586 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 WDR70Q9NW82 654 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 P4HTMQ9NXG6 502 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 FBXL4Q9UKA2 621 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 CHST2Q9Y4C5 530 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 MAGED1Q9Y5V3 778 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-227ENST00000475832 CFAP46Q8IYW2 2715 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 PIEZO2Q9H5I5 2752 aa11.23□□□□□ -0.61
MRPL55-227ENST00000475832 TRBV4-1A0A0J9YWV2 114 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 LOC101059948A0A1B0GTJ6 334 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 SH3PXD2BA1X283 911 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 TPST2O60704 377 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 OR2J2O76002 312 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 SNAP29O95721 258 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 GKN3PP0CG01 181 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 GSTM3P21266 225 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 EVI2BP34910 448 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 RNF144AP50876 292 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-227ENST00000475832 DAPP51397 102 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 SSR4P51571 173 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 CCR4P51679 360 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 ZNF136P52737 540 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 HOXC5Q00444 222 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 COX10Q12887 443 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 IL18R1Q13478 541 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 LAPTM4AQ15012 233 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 ZIK1Q3SY52 487 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-227ENST00000475832 SWT1Q5T5J6 900 aaKnown RBP11.22□□□□□ -0.61
MRPL55-227ENST00000475832 PODNL1Q6PEZ8 512 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 ULK3Q6PHR2 472 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 GDF7Q7Z4P5 450 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 MRGPREQ86SM8 312 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 RPS19BP1Q86WX3 136 aaKnown RBP11.22□□□□□ -0.61
MRPL55-227ENST00000475832 RNF113BQ8IZP6 322 aaKnown RBP11.22□□□□□ -0.61
MRPL55-227ENST00000475832 CADM2Q8N3J6 435 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 LSMEM1Q8N8F7 131 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 SETD9Q8NE22 299 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 DNAJA4Q8WW22 397 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-227ENST00000475832 ASB15Q8WXK1 588 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 TFAP2CQ92754 450 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 MPP4Q96JB8 637 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 CNBD2Q96M20 576 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 FER1L6-AS2Q96M78 137 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 CCNL2Q96S94 520 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-227ENST00000475832 RSPO3Q9BXY4 272 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-227ENST00000475832 LAT2Q9GZY6 243 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 TOR3AQ9H497 397 aa11.22□□□□□ -0.61
MRPL55-227ENST00000475832 RIBC2Q9H4K1 309 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms