RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 RBM44Q6ZP01 1051 aaKnown RBP8.88□□□□□ -0.99
ITGA6-210ENST00000475302 PRR23CQ6ZRP0 262 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 SHISA6Q6ZSJ9 500 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 PIP4P1Q86T03 277 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 KIF18BQ86Y91 864 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 APLFQ8IW19 511 aaPredicted RBP8.88□□□□□ -0.99
ITGA6-210ENST00000475302 PRSS58Q8IYP2 241 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 ZNF786Q8N393 782 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 SETD9Q8NE22 299 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 B3GNT7Q8NFL0 401 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 ACOT11Q8WXI4 607 aaPredicted RBP8.88□□□□□ -0.99
ITGA6-210ENST00000475302 SGCDQ92629 289 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 TP53INP1Q96A56 240 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 ZNF524Q96C55 264 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 SLC41A3Q96GZ6 507 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 ART5Q96L15 291 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 UCK2Q9BZX2 261 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 WWTR1Q9GZV5 400 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 HOXD1Q9GZZ0 328 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 RBM38Q9H0Z9 239 aaKnown RBP8.88□□□□□ -0.99
ITGA6-210ENST00000475302 PARD6AQ9NPB6 346 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 CTPS2Q9NRF8 586 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.88□□□□□ -0.99
ITGA6-210ENST00000475302 FKBP14Q9NWM8 211 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 PAK1IP1Q9NWT1 392 aaPredicted RBP8.88□□□□□ -0.99
ITGA6-210ENST00000475302 AASSQ9UDR5 926 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 RNF6Q9Y252 685 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 GMPPBQ9Y5P6 360 aa8.88□□□□□ -0.99
ITGA6-210ENST00000475302 GPR179Q6PRD1 2367 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 A0A0B4J2E0 115 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 C2orf92A0A1B0GVN3 265 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 A0A1B0GX12 115 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 PMS2P1A4D2B8 440 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 TRAPPC13A5PLN9 417 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 SAGE2PA6NJ88 616 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 CPSF4LA6NMK7 179 aaKnown RBP8.87□□□□□ -0.99
ITGA6-210ENST00000475302 AGRPO00253 132 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 SLC1A7O00341 560 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 AP3D1O14617 1153 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 OR10H3O60404 316 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 ZNF354AO60765 605 aaPredicted RBP8.87□□□□□ -0.99
ITGA6-210ENST00000475302 NADKO95544 446 aaPredicted RBP8.87□□□□□ -0.99
ITGA6-210ENST00000475302 CLPTM1O96005 669 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 UMODP07911 640 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 JUNBP17275 347 aaPredicted RBP8.87□□□□□ -0.99
ITGA6-210ENST00000475302 GTF2A1P52655 376 aaPredicted RBP8.87□□□□□ -0.99
ITGA6-210ENST00000475302 EMP2P54851 167 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 NR1H2P55055 460 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 NUP107P57740 925 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 GABARAPL2P60520 117 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 RNF4P78317 190 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 CDK5Q00535 292 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 E2F1Q01094 437 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 OR1Q1Q15612 314 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 NNATQ16517 81 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 CSRP2Q16527 193 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 ISXQ2M1V0 245 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 FGD3Q5JSP0 725 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 MFSD4BQ5TF39 518 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 ZNF613Q6PF04 617 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 MBOAT2Q6ZWT7 520 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 LSRQ86X29 649 aaPredicted RBP8.87□□□□□ -0.99
ITGA6-210ENST00000475302 OR8K3Q8NH51 312 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 CNIH3Q8TBE1 160 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 SLC38A4Q969I6 547 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 HSPBAP1Q96EW2 488 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 ZNF559Q9BR84 538 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 RTN4RQ9BZR6 473 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 UBQLN4Q9NRR5 601 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 PLCXD1Q9NUJ7 323 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 KIF17Q9P2E2 1029 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 TESQ9UGI8 421 aaKnown RBP8.87□□□□□ -0.99
ITGA6-210ENST00000475302 SLC13A4Q9UKG4 626 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 SEC16AO15027 2179 aa8.87□□□□□ -0.99
ITGA6-210ENST00000475302 NINQ8N4C6 2090 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 A0A087WXM4 84 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 DYRK3O43781 588 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 FADS1O60427 444 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 DLGAP3O95886 979 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 HEXBP07686 556 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 FPR3P25089 353 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 ACVR2AP27037 513 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 SLC5A2P31639 672 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 PNLIPRP2P54317 469 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 CTBP2P56545 445 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 SLC26A5P58743 744 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 SLC35A2P78381 396 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 IL1RL1Q01638 556 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 PRKCDQ05655 676 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 TSPAN31Q12999 210 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 TARDBPQ13148 414 aaKnown RBP eCLIP8.86□□□□□ -0.99
ITGA6-210ENST00000475302 TOP3AQ13472 1001 aaPredicted RBP8.86□□□□□ -0.99
ITGA6-210ENST00000475302 FHL1Q13642 323 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 CD226Q15762 336 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 SMN1Q16637 294 aaKnown RBP8.86□□□□□ -0.99
ITGA6-210ENST00000475302 NADK2Q4G0N4 442 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 SLC25A30Q5SVS4 291 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 XAF1Q6GPH4 301 aa8.86□□□□□ -0.99
ITGA6-210ENST00000475302 FAM199XQ6PEV8 388 aaPredicted RBP8.86□□□□□ -0.99
ITGA6-210ENST00000475302 BORAQ6PGQ7 559 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms