RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 MED31Q9Y3C7 131 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 SNX5Q9Y5X3 404 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 ZNF264O43296 627 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 LRP3O75074 770 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 CD63P08962 238 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 LINGO3P0C6S8 592 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 FPR3P25089 353 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 STAT5AP42229 794 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 CCR4P51679 360 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 SLX4IPQ5VYV7 408 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 RASSF6Q6ZTQ3 369 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 ZNF540Q8NDQ6 660 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 RHOXF1Q8NHV9 184 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 THAP3Q8WTV1 239 aaPredicted RBP18.19■□□□□ 0.5
SSR1-204ENST00000474597 TBL1XR1Q9BZK7 514 aa18.19■□□□□ 0.5
SSR1-204ENST00000474597 SMIM31A0A1B0GVY4 71 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 ADAM11O75078 769 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 LYPD3O95274 346 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 TP53P04637 393 aaPredicted RBP18.18■□□□□ 0.5
SSR1-204ENST00000474597 FOLR3P41439 243 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 CD226Q15762 336 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 SMN1Q16637 294 aaKnown RBP18.18■□□□□ 0.5
SSR1-204ENST00000474597 FNDC7Q5VTL7 733 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 ULK3Q6PHR2 472 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 WDR88Q6ZMY6 472 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 ZNF517Q6ZMY9 492 aaPredicted RBP18.18■□□□□ 0.5
SSR1-204ENST00000474597 KCTD8Q6ZWB6 473 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 OR8K3Q8NH51 312 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 APH1BQ8WW43 257 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 MPP4Q96JB8 637 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 DDA1Q9BW61 102 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 CCDC90BQ9GZT6 254 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 PARD6AQ9NPB6 346 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 ZNF226Q9NYT6 803 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 PADI1Q9ULC6 663 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 TMEM5Q9Y2B1 443 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 NPFFR2Q9Y5X5 522 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 WDR87Q6ZQQ6 2873 aa18.18■□□□□ 0.5
SSR1-204ENST00000474597 WBP4O75554 376 aaKnown RBP18.17■□□□□ 0.5
SSR1-204ENST00000474597 ZFAND5O76080 213 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 IFI30P13284 250 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 SMSP52788 366 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 TEKQ02763 1124 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 TCF15Q12870 199 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 FAM69BQ5VUD6 431 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 DHRS13Q6UX07 377 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 C6orf15Q6UXA7 325 aaPredicted RBP18.17■□□□□ 0.5
SSR1-204ENST00000474597 HEATR5AQ86XA9 2040 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 FAM71CQ8NEG0 241 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 OR2Y1Q8NGV0 311 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 PRRX2Q99811 253 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 DSN1Q9H410 356 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 EGLN3Q9H6Z9 239 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 ZBTB20Q9HC78 741 aaPredicted RBP18.17■□□□□ 0.5
SSR1-204ENST00000474597 EXOSC3Q9NQT5 275 aaKnown RBP18.17■□□□□ 0.5
SSR1-204ENST00000474597 CLN6Q9NWW5 311 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 CARD8Q9Y2G2 431 aa18.17■□□□□ 0.5
SSR1-204ENST00000474597 CCDC187A0A096LP49 1063 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 A0A1W2PQD3 144 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 KPNA4O00629 521 aaPredicted RBP18.16■□□□□ 0.5
SSR1-204ENST00000474597 PLD2O14939 933 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 NDUFB5O43674 189 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 OR6B1O95007 311 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 ENDOUP21128 410 aaKnown RBP18.16■□□□□ 0.5
SSR1-204ENST00000474597 ALDH3B2P48448 385 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 EFR3AQ14156 821 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 GINS1Q14691 196 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 TRIP6Q15654 476 aaKnown RBP18.16■□□□□ 0.5
SSR1-204ENST00000474597 C12orf73Q69YU5 71 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 DESI1Q6ICB0 168 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 KIRREL2Q6UWL6 708 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 APOOLQ6UXV4 268 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 PFN4Q8NHR9 129 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 DNAJA4Q8WW22 397 aaPredicted RBP18.16■□□□□ 0.5
SSR1-204ENST00000474597 NODALQ96S42 347 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 CCNB1IP1Q9NPC3 277 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 LOC102723996A0A087X1L8 192 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 OR6C70A6NIJ9 312 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 M0R129 80 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 WWP2O00308 870 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 UMODP07911 640 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 NGFRP08138 427 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 RBM34P42696 430 aaKnown RBP18.16■□□□□ 0.5
SSR1-204ENST00000474597 GIPRP48546 466 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 PRKCDQ05655 676 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 SKP2Q13309 424 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 EIF3IQ13347 325 aaKnown RBP18.16■□□□□ 0.5
SSR1-204ENST00000474597 TMEM164Q5U3C3 297 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 KIF18BQ86Y91 864 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 CCDC103Q8IW40 242 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 IQCF1Q8N6M8 205 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 AMER2Q8N7J2 671 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 WDR36Q8NI36 951 aaKnown RBP18.16■□□□□ 0.5
SSR1-204ENST00000474597 IPCEF1Q8WWN9 437 aaPredicted RBP18.16■□□□□ 0.5
SSR1-204ENST00000474597 OSTF1Q92882 214 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 TEX12Q9BXU0 123 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 LAT2Q9GZY6 243 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 TBC1D23Q9NUY8 699 aa18.16■□□□□ 0.5
SSR1-204ENST00000474597 CCDC160A6NGH7 325 aa18.15■□□□□ 0.5
SSR1-204ENST00000474597 ALG1L2C9J202 215 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms