RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 ZIC1Q15915 447 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 PXDC1Q5TGL8 231 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 MRM1Q6IN84 353 aaKnown RBP13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 FRRS1Q6ZNA5 592 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 ESPNLQ6ZVH7 1005 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 OR2A1Q8NGT9 310 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 KISS1RQ969F8 398 aaPredicted RBP13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 LGR4Q9BXB1 951 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 BRD7Q9NPI1 651 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 INPP5EQ9NRR6 644 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 A0A1W2PRG6 482 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 SYNDIG1LA6NDD5 238 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 ANTXRLA6NF34 631 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 SLC22A31A6NKX4 558 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 ZNF593O00488 134 aaPredicted RBP13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 FGF18O76093 207 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 ANKRD34CP0C6C1 535 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 CISD3P0C7P0 127 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 PRG2P13727 222 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 DDX6P26196 483 aaKnown RBP eCLIP13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 TEAD1P28347 426 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 OR12D2P58182 307 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 CRYZQ08257 329 aaKnown RBP13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 FCRLBQ6BAA4 426 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 ZNF836Q6ZNA1 936 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 FGD2Q7Z6J4 655 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 SLC44A3Q8N4M1 653 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 SLC16A11Q8NCK7 471 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 OR4D9Q8NGE8 314 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 OR2T35Q8NGX2 323 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 CDS1Q92903 461 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 COX14Q96I36 57 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 TEAD3Q99594 435 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 IFT27Q9BW83 186 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 ZMIZ1Q9ULJ6 1067 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 WDR45Q9Y484 360 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 NPFFR2Q9Y5X5 522 aa13.23□□□□□ -0.29
NHLRC3-204ENST00000473371 CDHR4A6H8M9 788 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 TRABD2BA6NFA1 517 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 BHLHE40O14503 412 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 MAKP20794 623 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 PYCR1P32322 319 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 ARFIP1P53367 373 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 FXYD6P3P58550 94 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 SUZ12Q15022 739 aaKnown RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 ERN2Q76MJ5 926 aaKnown RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 PRSS45Q7RTY3 260 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 PXKQ7Z7A4 578 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 SYT9Q86SS6 491 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 C12orf40Q86WS4 652 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 TMIEQ8NEW7 156 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 OR56B4Q8NH76 319 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 PFN4Q8NHR9 129 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 PXYLP1Q8TE99 480 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 POF1BQ8WVV4 589 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 NXPE3Q969Y0 559 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 RBP7Q96R05 134 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 C7orf50Q9BRJ6 194 aaKnown RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 MTHFD2LQ9H903 347 aaPredicted RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 MRPS30Q9NP92 439 aaKnown RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 ATF1P18846 271 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 RAG2P55895 527 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 PUDPQ08623 228 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 TCEAL5Q5H9L2 206 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 TMEM65Q6PI78 240 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 GET4Q7L5D6 327 aaPredicted RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 HDDC2Q7Z4H3 204 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 OR2L5Q8NG80 312 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 WFIKKN2Q8TEU8 576 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 GHSRQ92847 366 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 PTP4A1Q93096 173 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 COL26A1Q96A83 441 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 C1QTNF7Q9BXJ2 289 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 ACTR6Q9GZN1 396 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 C6orf106Q9H6K1 298 aaPredicted RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 DUXAA6NLW8 204 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 CFDP00746 253 aaPredicted RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 WNT1P04628 370 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 LCN1P31025 176 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 PPM1AP35813 382 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 SOX9P48436 509 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 TAGLNQ01995 201 aaKnown RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 RPL6Q02878 288 aaKnown RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 TMEM52BQ4KMG9 183 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 SLC22A10Q63ZE4 541 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 RANBP3LQ86VV4 465 aaPredicted RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 IZUMO1Q8IYV9 350 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 LNX2Q8N448 690 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 FTMTQ8N4E7 242 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 GALNT11Q8NCW6 608 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 GIMAP5Q96F15 307 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 INSM2Q96T92 566 aaPredicted RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 PRSS27Q9BQR3 290 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 RBCK1Q9BYM8 510 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 TTTY10Q9BZA0 68 aa13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 ZNF436Q9C0F3 470 aaPredicted RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 METTL17Q9H7H0 456 aaPredicted RBP13.22□□□□□ -0.29
NHLRC3-204ENST00000473371 ABRACLQ9P1F3 81 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms