RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 LINC01620Q4KN68 170 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 C2orf83Q53S99 150 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 DPY19L4Q7Z388 723 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 ZNF589Q86UQ0 364 aaPredicted RBP2.42□□□□□ -2.02
CLCC1-208ENST00000473062 PNPT1Q8TCS8 783 aaKnown RBP2.42□□□□□ -2.02
CLCC1-208ENST00000473062 MARC2Q969Z3 335 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 C7orf34Q96L11 122 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 ZNF184Q99676 751 aaPredicted RBP2.42□□□□□ -2.02
CLCC1-208ENST00000473062 CITED1Q99966 193 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 TMEM121Q9BTD3 319 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 THUMPD2Q9BTF0 503 aaKnown RBP2.42□□□□□ -2.02
CLCC1-208ENST00000473062 NANOGQ9H9S0 305 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 SH2D2AQ9NP31 389 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 FANCFQ9NPI8 374 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 ONECUT1Q9UBC0 465 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 MFHAS1Q9Y4C4 1052 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 ALG6Q9Y672 507 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 ADAMTS9Q9P2N4 1935 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 ATP8B3O60423 1300 aa2.42□□□□□ -2.02
CLCC1-208ENST00000473062 IGHV1OR15-1A0A075B7D0 117 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 PP2D1A8MPX8 630 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 CDX4O14627 284 aaPredicted RBP2.41□□□□□ -2.02
CLCC1-208ENST00000473062 CTAGE5O15320 804 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 STX7O15400 261 aaKnown RBP2.41□□□□□ -2.02
CLCC1-208ENST00000473062 MSH4O15457 936 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 EMC8O43402 210 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 POU2F1P14859 743 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 IGLL1P15814 213 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 DESP17661 470 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 XRCC1P18887 633 aaPredicted RBP2.41□□□□□ -2.02
CLCC1-208ENST00000473062 PGCP20142 388 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 CD80P33681 288 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 UGT1A5P35504 534 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 MDH1P40925 334 aaKnown RBP2.41□□□□□ -2.02
CLCC1-208ENST00000473062 BTDP43251 543 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 SSR1P43307 286 aaKnown RBP2.41□□□□□ -2.02
CLCC1-208ENST00000473062 MAGEA5P43359 124 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 RPS8P62241 208 aaKnown RBP2.41□□□□□ -2.02
CLCC1-208ENST00000473062 NUCB2P80303 420 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 RIPK1Q13546 671 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 DPYSL3Q14195 570 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 LAGE3Q14657 143 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 SYPL1Q16563 259 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 RABGAP1LQ5R372 815 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 SPATA46Q5T0L3 261 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 ACSM5Q6NUN0 579 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 BLOC1S2Q6QNY1 142 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 LCA5Q86VQ0 697 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 CCDC50Q8IVM0 306 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 LINC01555Q8NAE3 123 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 OR2T33Q8NG76 320 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 RAET1EQ8TD07 263 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 SPRYD4Q8WW59 207 aaPredicted RBP2.41□□□□□ -2.02
CLCC1-208ENST00000473062 FRAT1Q92837 279 aaPredicted RBP2.41□□□□□ -2.02
CLCC1-208ENST00000473062 ELSPBP1Q96BH3 223 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 EBF4Q9BQW3 602 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 CCSER1Q9C0I3 900 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 UTP6Q9NYH9 597 aaKnown RBP2.41□□□□□ -2.02
CLCC1-208ENST00000473062 C6orf203Q9P0P8 240 aaPredicted RBP2.41□□□□□ -2.02
CLCC1-208ENST00000473062 WRAP73Q9P2S5 460 aaPredicted RBP2.41□□□□□ -2.02
CLCC1-208ENST00000473062 EPS15L1Q9UBC2 864 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 TBK1Q9UHD2 729 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 MRPS7Q9Y2R9 242 aaKnown RBP2.41□□□□□ -2.02
CLCC1-208ENST00000473062 IFT52Q9Y366 437 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 OR10H1Q9Y4A9 318 aa2.41□□□□□ -2.02
CLCC1-208ENST00000473062 SF3B1O75533 1304 aaKnown RBP eCLIP2.41□□□□□ -2.024e-15■■■■■ 68.9
CLCC1-208ENST00000473062 METP08581 1390 aa2.4□□□□□ -2.02
CLCC1-208ENST00000473062 LOC100131303A0A0U1RQF7 123 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.4□□□□□ -2.03
CLCC1-208ENST00000473062 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.4□□□□□ -2.03
CLCC1-208ENST00000473062 PPIAL4DF5H284 164 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 ANGPT2O15123 496 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 LATO43561 262 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 EFNA2O43921 213 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 RHOBTB1O94844 696 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 LRATO95237 230 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 SNAPINO95295 136 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 ADCY5O95622 1261 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 PTBP3O95758 552 aaKnown RBP2.4□□□□□ -2.03
CLCC1-208ENST00000473062 ASNSP08243 561 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 NDPQ00604 133 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 CCDC173Q0VFZ6 552 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 CHI3L2Q15782 390 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 WSCD1Q658N2 575 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 CXCL17Q6UXB2 119 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 MOB3BQ86TA1 216 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 TPRA1Q86W33 373 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 C17orf82Q86X59 251 aaPredicted RBP2.4□□□□□ -2.03
CLCC1-208ENST00000473062 SYT14Q8NB59 555 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 STXBP6Q8NFX7 210 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 CNIH3Q8TBE1 160 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 ZNF564Q8TBZ8 553 aaPredicted RBP2.4□□□□□ -2.03
CLCC1-208ENST00000473062 OR1E3Q8WZA6 343 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 HAVCR1Q96D42 359 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 SH3YL1Q96HL8 342 aaPredicted RBP2.4□□□□□ -2.03
CLCC1-208ENST00000473062 MS4A14Q96JA4 679 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 MCHR1Q99705 422 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 TXN2Q99757 166 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 OMDQ99983 421 aa2.4□□□□□ -2.03
CLCC1-208ENST00000473062 SLC35A5Q9BS91 424 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms