RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 TMEM176BQ3YBM2 270 aaPredicted RBP8.89□□□□□ -0.99
CDHR3-209ENST00000472116 SAXO2Q658L1 398 aa8.89□□□□□ -0.99
CDHR3-209ENST00000472116 ACSM5Q6NUN0 579 aa8.89□□□□□ -0.99
CDHR3-209ENST00000472116 LEG1Q6P5S2 330 aa8.89□□□□□ -0.99
CDHR3-209ENST00000472116 RAD9BQ6WBX8 426 aa8.89□□□□□ -0.99
CDHR3-209ENST00000472116 Q6ZPA2 131 aa8.89□□□□□ -0.99
CDHR3-209ENST00000472116 CCDC116Q8IYX3 515 aa8.89□□□□□ -0.99
CDHR3-209ENST00000472116 SAMD14Q8IZD0 417 aaPredicted RBP8.89□□□□□ -0.99
CDHR3-209ENST00000472116 ACTRT2Q8TDY3 377 aa8.89□□□□□ -0.99
CDHR3-209ENST00000472116 MUS81Q96NY9 551 aa8.89□□□□□ -0.99
CDHR3-209ENST00000472116 ZNF300Q96RE9 604 aaPredicted RBP8.89□□□□□ -0.99
CDHR3-209ENST00000472116 BBS4Q96RK4 519 aa8.89□□□□□ -0.99
CDHR3-209ENST00000472116 POPDC3Q9HBV1 291 aa8.89□□□□□ -0.99
CDHR3-209ENST00000472116 TESQ9UGI8 421 aaKnown RBP8.89□□□□□ -0.99
CDHR3-209ENST00000472116 UTS2RQ9UKP6 389 aa8.89□□□□□ -0.99
CDHR3-209ENST00000472116 CES1P1Q9UKY3 287 aa8.89□□□□□ -0.99
CDHR3-209ENST00000472116 NOSIPQ9Y314 301 aaKnown RBP8.89□□□□□ -0.99
CDHR3-209ENST00000472116 SH3PXD2BA1X283 911 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 LYNX1G3V0Z9 82 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 H0YIV9 168 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 MPZL1O95297 269 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 UTS2O95399 124 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 LYNX1P0DP58 116 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 HPGDP15428 266 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 PCGF2P35227 344 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 MAGEA3P43357 314 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 TAS2R39P59534 338 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 RAC3P60763 192 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 ATP6V0D1P61421 351 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 PSG6Q00889 435 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 TGFBR3Q03167 851 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 ADIPOQQ15848 244 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 FAM180BQ6P0A1 224 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 GALNT18Q6P9A2 607 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 SPATC1Q76KD6 591 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 DOK3Q7L591 496 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 AGGF1Q8N302 714 aaeCLIP8.88□□□□□ -0.99
CDHR3-209ENST00000472116 TEX9Q8N6V9 391 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 ATP6V1C2Q8NEY4 427 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 OR9A2Q8NGT5 310 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 RNF217Q8TC41 542 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 MRAPQ8TCY5 172 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 TRPC4APQ8TEL6 797 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 WFDC12Q8WWY7 111 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 TMIGD2Q96BF3 282 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 CNRIP1Q96F85 164 aaPredicted RBP8.88□□□□□ -0.99
CDHR3-209ENST00000472116 RBM4BQ9BQ04 359 aaKnown RBP8.88□□□□□ -0.99
CDHR3-209ENST00000472116 MCMBPQ9BTE3 642 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 TMPRSS13Q9BYE2 586 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 LACRTQ9GZZ8 138 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 C7orf69Q9H7B7 122 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 BEX1Q9HBH7 125 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 G6PC2Q9NQR9 355 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 ZDHHC2Q9UIJ5 367 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 MID2Q9UJV3 735 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 MMP24Q9Y5R2 645 aa8.88□□□□□ -0.99
CDHR3-209ENST00000472116 PLXNB1O43157 2135 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 ARHGAP32A7KAX9 2087 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 SUPT3HB4E1H0 165 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 UGDHO60701 494 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 CYTIPO60759 359 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 SUPT3HO75486 399 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 KCNH1O95259 989 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 NUDT14O95848 222 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 ACHEP22303 614 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 GATA3P23771 443 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 EDNRAP25101 427 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 SHC1P29353 583 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 SLC18A2Q05940 514 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 SRSF4Q08170 494 aaKnown RBP8.87□□□□□ -0.99
CDHR3-209ENST00000472116 KCTD19Q17RG1 926 aaPredicted RBP8.87□□□□□ -0.99
CDHR3-209ENST00000472116 GRAMD1BQ3KR37 738 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 REP15Q6BDI9 236 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 SPATA21Q7Z572 469 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 FAM9CQ8IZT9 166 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 ZCCHC24Q8N2G6 241 aaKnown RBP8.87□□□□□ -0.99
CDHR3-209ENST00000472116 GATSQ8NAP1 163 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 C1orf162Q8NEQ5 155 aaPredicted RBP8.87□□□□□ -0.99
CDHR3-209ENST00000472116 ARL8AQ96BM9 186 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 LRRC58Q96CX6 371 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 RAB39BQ96DA2 213 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 TSPAN17Q96FV3 270 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 SH3YL1Q96HL8 342 aaPredicted RBP8.87□□□□□ -0.99
CDHR3-209ENST00000472116 ARL5BQ96KC2 179 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 ANKRD27Q96NW4 1050 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 NPAS1Q99742 590 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 SLC17A5Q9NRA2 495 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 NUDT4Q9NZJ9 180 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 UPB1Q9UBR1 384 aa8.87□□□□□ -0.99
CDHR3-209ENST00000472116 SLC22A31A6NKX4 558 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 PPIHO43447 177 aaKnown RBP8.86□□□□□ -0.99
CDHR3-209ENST00000472116 PLOD3O60568 738 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 MRPL33O75394 65 aaKnown RBP8.86□□□□□ -0.99
CDHR3-209ENST00000472116 CRYBA1P05813 215 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 NPR2P20594 1047 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 OMGP23515 440 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 GP5P40197 560 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 FOXF1Q12946 379 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 OR4D1Q15615 310 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 FAM189A2Q15884 450 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms