RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ARMCX5Q6P1M9 558 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 EMBQ6PCB8 327 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 PAQR7Q86WK9 346 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 TGIF2LXQ8IUE1 241 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 SLC35F2Q8IXU6 374 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 SDR9C7Q8NEX9 313 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 MAIP1Q8WWC4 291 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 OR5B2Q96R09 309 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 TM2D1Q9BX74 207 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 RHBGQ9H310 441 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 AZI2Q9H6S1 392 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 SLC2A8Q9NY64 477 aa5.37□□□□□ -1.55
SMC5-202ENST00000471372 RPAP1Q9BWH6 1393 aaPredicted RBP5.37□□□□□ -1.55
SMC5-202ENST00000471372 IGLV7-46A0A075B6I9 117 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 BOLA2-SMG1P6H3BVE0 249 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 POLR2DO15514 142 aaKnown RBP5.36□□□□□ -1.55
SMC5-202ENST00000471372 RAMP3O60896 148 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 DNAJB6O75190 326 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 CTAG2O75638 210 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 POP4O95707 220 aaKnown RBP5.36□□□□□ -1.55
SMC5-202ENST00000471372 GAPDHP04406 335 aaKnown RBP5.36□□□□□ -1.55
SMC5-202ENST00000471372 ATP1B2P14415 290 aaPredicted RBP5.36□□□□□ -1.55
SMC5-202ENST00000471372 IDSP22304 550 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 LMO2P25791 158 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 GCAP28676 217 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 OXTRP30559 389 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 HNRNPH3P31942 346 aaKnown RBP5.36□□□□□ -1.55
SMC5-202ENST00000471372 ACVR1BP36896 505 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 RND3P61587 244 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 KLRB1Q12918 225 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 GK3PQ14409 553 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 ARHGAP19Q14CB8 494 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 DPYSL2Q16555 572 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 RNASEKQ6P5S7 137 aaKnown RBP5.36□□□□□ -1.55
SMC5-202ENST00000471372 CLEC2AQ6UVW9 174 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 LRRTM1Q86UE6 522 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 TRIM69Q86WT6 500 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 CATSPER3Q86XQ3 398 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 CCDC50Q8IVM0 306 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 ARL14Q8N4G2 192 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 BBOF1Q8ND07 529 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 CATSPER1Q8NEC5 780 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 ADAMTS16Q8TE57 1224 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 TRUB1Q8WWH5 349 aaKnown RBP5.36□□□□□ -1.55
SMC5-202ENST00000471372 C12orf42Q96LP6 360 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 NIPSNAP3BQ9BS92 247 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 WRAP73Q9P2S5 460 aaPredicted RBP5.36□□□□□ -1.55
SMC5-202ENST00000471372 SLC2A6Q9UGQ3 507 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 ASIC3Q9UHC3 531 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 SLC7A8Q9UHI5 535 aa5.36□□□□□ -1.55
SMC5-202ENST00000471372 PRPF19Q9UMS4 504 aaKnown RBP5.36□□□□□ -1.55
SMC5-202ENST00000471372 IGHV2-70DA0A0C4DH43 119 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.35□□□□□ -1.55
SMC5-202ENST00000471372 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.35□□□□□ -1.55
SMC5-202ENST00000471372 HAS3O00219 553 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 DFNA5O60443 496 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 CLDN9O95484 217 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 CST1P01037 141 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 SNRPCP09234 159 aaKnown RBP5.35□□□□□ -1.55
SMC5-202ENST00000471372 CCDC130P13994 396 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 POLR2EP19388 210 aaKnown RBP5.35□□□□□ -1.55
SMC5-202ENST00000471372 CASP14P31944 242 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 HMGCLP35914 325 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 EPS15P42566 896 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 OR1D4P47884 311 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 PUDPQ08623 228 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 VGLL4Q14135 290 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 PPP1R3AQ16821 1122 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 CNPY1Q3B7I2 92 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 TMEM30BQ3MIR4 351 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 TEX44Q53QW1 395 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 DMRTC1Q5HYR2 192 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 FAM199XQ6PEV8 388 aaPredicted RBP5.35□□□□□ -1.55
SMC5-202ENST00000471372 H2BFWTQ7Z2G1 175 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 TPRA1Q86W33 373 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 FAM83FQ8NEG4 500 aaPredicted RBP5.35□□□□□ -1.55
SMC5-202ENST00000471372 SPATA4Q8NEY3 305 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 OR1L6Q8NGR2 347 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 OR4Q3Q8NH05 313 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 STARD8Q92502 1023 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 GTF3AQ92664 365 aaKnown RBP5.35□□□□□ -1.55
SMC5-202ENST00000471372 ZNF597Q96LX8 424 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 PANX1Q96RD7 426 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 EXO5Q9H790 373 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 POPDC2Q9HBU9 364 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 PAK1IP1Q9NWT1 392 aaPredicted RBP5.35□□□□□ -1.55
SMC5-202ENST00000471372 KLHL28Q9NXS3 571 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 EHFQ9NZC4 300 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 PRODH2Q9UF12 536 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 PSME2Q9UL46 239 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 PROCRQ9UNN8 238 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 CA5BQ9Y2D0 317 aa5.35□□□□□ -1.55
SMC5-202ENST00000471372 USP6P35125 1406 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 PHLPP2Q6ZVD8 1323 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 PPIAL4EA0A075B759 164 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 IGHV3-16A0A0C4DH30 117 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 GOLGA6L7A0A1B0GV03 622 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 A0A1W2PPE3 182 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 A8MXK9 166 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 F5H6K3 240 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms