RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ZNF337Q9Y3M9 751 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 ZNF175Q9Y473 711 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 TACC2O95359 2948 aa12.18□□□□□ -0.46
HMGN1-211ENST00000471260 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 A0A1W2PQD3 144 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 OR2M5A3KFT3 312 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 A8MXE2 369 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 AHCYL1O43865 530 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 TNFSF13O75888 250 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 OXSR1O95747 527 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-211ENST00000471260 TGM6O95932 706 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 IGKV1D-16P01601 117 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 ACP2P11117 423 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 HPGDP15428 266 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 ZNF17P17021 662 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 NCF2P19878 526 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-211ENST00000471260 PRPS1L1P21108 318 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 HSPA13P48723 471 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 ATP4BP51164 291 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 CLDN15P56746 228 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 C21orf58P58505 322 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 SLC25A3Q00325 362 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 SNTB1Q13884 538 aaKnown RBP12.17□□□□□ -0.46
HMGN1-211ENST00000471260 CCNIQ14094 377 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 DUSP5Q16690 384 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 CPTPQ5TA50 214 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 IL23RQ5VWK5 629 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 TMEM154Q6P9G4 183 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 IZUMO2Q6UXV1 221 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 UBQLNLQ8IYU4 475 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 DEFB107AQ8IZN7 70 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 GCNT2Q8N0V5 402 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 METTL25Q8N6Q8 603 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 COX18Q8N8Q8 333 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 FNDC5Q8NAU1 212 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 OR4C3Q8NH37 302 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 AGR3Q8TD06 166 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 MOAP1Q96BY2 351 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 C3orf30Q96M34 536 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 FOXC2Q99958 501 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 BTBD2Q9BX70 525 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 BHLHE41Q9C0J9 482 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-211ENST00000471260 PIGUQ9H490 435 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 Q9H521 79 aa12.17□□□□□ -0.46
HMGN1-211ENST00000471260 ZCCHC3Q9NUD5 404 aaKnown RBP12.17□□□□□ -0.46
HMGN1-211ENST00000471260 EIF3LQ9Y262 564 aaKnown RBP12.17□□□□□ -0.46
HMGN1-211ENST00000471260 A0A1W2PNV4 684 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 C7orf72A4D263 438 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 C17orf51A8MQB3 221 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 SCDO00767 359 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 HMGN2P05204 90 aaKnown RBP12.16□□□□□ -0.46
HMGN1-211ENST00000471260 FESP07332 822 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 LINGO3P0C6S8 592 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 LAMP1P11279 417 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 FCGR2AP12318 317 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 CALRP27797 417 aaKnown RBP12.16□□□□□ -0.46
HMGN1-211ENST00000471260 CCT3P49368 545 aaKnown RBP12.16□□□□□ -0.46
HMGN1-211ENST00000471260 SUCLG1P53597 346 aaKnown RBP12.16□□□□□ -0.46
HMGN1-211ENST00000471260 IST1P53990 364 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 POU6F2P78424 691 aaPredicted RBP12.16□□□□□ -0.46
HMGN1-211ENST00000471260 EMX2Q04743 252 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 CYLC2Q14093 348 aaPredicted RBP12.16□□□□□ -0.46
HMGN1-211ENST00000471260 PTGR1Q14914 329 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 SLC9B1Q4ZJI4 515 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 CDC73Q6P1J9 531 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 BHLHB9Q6PI77 547 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 FIGNL1Q6PIW4 674 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 CAMKMTQ7Z624 323 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 LUZP2Q86TE4 346 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 CDC20BQ86Y33 519 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 OR7A2PQ8NGA2 310 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 OR56A1Q8NGH5 318 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 ZBTB8AQ96BR9 441 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 TUBGCP3Q96CW5 907 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 KLHL4Q9C0H6 718 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 HOXD1Q9GZZ0 328 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 CXXC4Q9H2H0 198 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 RNF122Q9H9V4 155 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 GALNT8Q9NY28 637 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 ASIC5Q9NY37 505 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 NDRG3Q9UGV2 375 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 ST6GALNAC2Q9UJ37 374 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 PCNX3Q9H6A9 2034 aa12.16□□□□□ -0.46
HMGN1-211ENST00000471260 E9PBE3 544 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 H3BML4 177 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 SKAP2O75563 359 aaPredicted RBP12.15□□□□□ -0.46
HMGN1-211ENST00000471260 TCEA1P23193 301 aaKnown RBP12.15□□□□□ -0.46
HMGN1-211ENST00000471260 ART1P52961 327 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 CLDN8P56748 225 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 SQLEQ14534 574 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 LASP1Q14847 261 aaKnown RBP12.15□□□□□ -0.46
HMGN1-211ENST00000471260 OGFRL1Q5TC84 451 aaPredicted RBP12.15□□□□□ -0.46
HMGN1-211ENST00000471260 RIMKLAQ8IXN7 391 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 GTPBP8Q8N3Z3 284 aaPredicted RBP12.15□□□□□ -0.46
HMGN1-211ENST00000471260 POU5F2Q8N7G0 328 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 ZNF527Q8NB42 609 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 LINC01560Q8TB33 94 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 SFXN5Q8TD22 340 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 ADAMTS15Q8TE58 950 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 STARD4Q96DR4 205 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms