RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 MRPL2Q5T653 305 aaKnown RBP13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 CBLN3Q6UW01 205 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 C16orf89Q6UX73 402 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 CCDC80Q76M96 950 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 GRAMD2AQ8IUY3 354 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 CHERPQ8IWX8 916 aaKnown RBP13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 FAM83FQ8NEG4 500 aaPredicted RBP13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 SLC35B4Q969S0 331 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 LAT2Q9GZY6 243 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 DSN1Q9H410 356 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 ALG2Q9H553 416 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 DNAJB12Q9NXW2 375 aaKnown RBP13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 TAS2R10Q9NYW0 307 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 DKKL1Q9UK85 242 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 PRDM4Q9UKN5 801 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF443Q9Y2A4 671 aaPredicted RBP13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 CARD8Q9Y2G2 431 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 LIPGQ9Y5X9 500 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 PDZD2O15018 2839 aa13.56□□□□□ -0.24
CDC42SE1-203ENST00000470278 ANKRD17O75179 2603 aaKnown RBP13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 TRGV5A0A0B4J1U4 118 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 PRORSD1PA6NEY8 169 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 CCT8L1PA6NM43 557 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 CLDN24A6NM45 220 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 GTPBP1O00178 669 aaKnown RBP13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 ETV2O00321 342 aaPredicted RBP13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 OIP5O43482 229 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 SERPINB7O75635 380 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 WISP2O76076 250 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 UBTFL6P0CB48 400 aaPredicted RBP13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF17P17021 662 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 CPOXP36551 454 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 LIPEQ05469 1076 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 TMEM44Q2T9K0 475 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 SPATS1Q496A3 300 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 DHRS4L2Q6PKH6 230 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF836Q6ZNA1 936 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 HMGN2P46Q86SG4 172 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 PATL1Q86TB9 770 aaKnown RBP13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 IFNEQ86WN2 208 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 VRK2Q86Y07 508 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 SPPL2CQ8IUH8 684 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 BHLHE22Q8NFJ8 381 aaPredicted RBP13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 OR5W2Q8NH69 310 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 FBXO27Q8NI29 283 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 NEIL3Q8TAT5 605 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 SSC4DQ8WTU2 575 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZBTB8AQ96BR9 441 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 SH3YL1Q96HL8 342 aaPredicted RBP13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 DEFB127Q9H1M4 99 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 C1orf21Q9H246 121 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 ARMC7Q9H6L4 198 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF232Q9UNY5 417 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF407Q9C0G0 2248 aa13.55□□□□□ -0.24
CDC42SE1-203ENST00000470278 ELOVL7A1L3X0 281 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 WIPF3A6NGB9 483 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 FAAHO00519 579 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZIC3O60481 467 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 CDC40O60508 579 aaKnown RBP eCLIP13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 BCAS1O75363 584 aaPredicted RBP13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 GCM2O75603 506 aaPredicted RBP13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 TRAPPC6AO75865 159 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 UBOX5O94941 541 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 AGFG2O95081 481 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 MFN2O95140 757 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 CLDN1O95832 211 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 AQP1P29972 269 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 SLC6A8P48029 635 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 GSK3BP49841 420 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 RNF144AP50876 292 aaPredicted RBP13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF41P51814 821 aaPredicted RBP13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 GFRA1P56159 465 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 DLX5P56178 289 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 RBPJQ06330 500 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 CBFBQ13951 182 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 TOMM20Q15388 145 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 FXNQ16595 210 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 PLPPR5Q32ZL2 321 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 NDUFAF6Q330K2 333 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 EIPR1Q53HC9 387 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF311Q5JNZ3 666 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 GFRALQ6UXV0 394 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 FGD2Q7Z6J4 655 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF440Q8IYI8 595 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 MICU2Q8IYU8 434 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 RBM15BQ8NDT2 890 aaKnown RBP13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 OR14L1PQ8NHC6 308 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 SLC6A15Q9H2J7 730 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 EVA1AQ9H8M9 152 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 MED17Q9NVC6 651 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 ZNF835Q9Y2P0 537 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 CHST2Q9Y4C5 530 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 TACC2O95359 2948 aa13.54□□□□□ -0.24
CDC42SE1-203ENST00000470278 CELSR1Q9NYQ6 3014 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 A0A1B0GTH9 108 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 B2RBV5 119 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 LINC01387J3KSC0 135 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 BCKDKO14874 412 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 ACTL6AO96019 429 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms