RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 RNF6Q9Y252 685 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 INTS1Q8N201 2190 aaKnown RBP13.17□□□□□ -0.3
COL27A1-203ENST00000468565 PCNX3Q9H6A9 2034 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 SCAMP2O15127 329 aaKnown RBP13.17□□□□□ -0.3
COL27A1-203ENST00000468565 CBR3O75828 277 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 PGM3O95394 542 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 GGT1P19440 569 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 GPC1P35052 558 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 CLDN8P56748 225 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 PMPCAQ10713 525 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 HSPB3Q12988 150 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 SELPLGQ14242 412 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 MLC1Q15049 377 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 CNPY1Q3B7I2 92 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 SPANXN4Q5MJ08 99 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 WDSUB1Q8N9V3 476 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 OR4N2Q8NGD1 307 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 EFHD2Q96C19 240 aaPredicted RBP13.17□□□□□ -0.3
COL27A1-203ENST00000468565 CCDC115Q96NT0 180 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 OR52E6Q96RD3 313 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 THUMPD3Q9BV44 507 aaKnown RBP13.17□□□□□ -0.3
COL27A1-203ENST00000468565 RMND5AQ9H871 391 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 Q9N2J8 555 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 NTMQ9P121 344 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 CBLCQ9ULV8 474 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 PCDHGB4Q9UN71 923 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 USP22Q9UPT9 525 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 PCDHGB5Q9Y5G0 923 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 WIF1Q9Y5W5 379 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 MED12Q93074 2177 aa13.17□□□□□ -0.3
COL27A1-203ENST00000468565 GLI4P10075 376 aa13.16□□□□□ -0.3
COL27A1-203ENST00000468565 S100A3P33764 101 aa13.16□□□□□ -0.3
COL27A1-203ENST00000468565 MANFP55145 182 aaKnown RBP13.16□□□□□ -0.3
COL27A1-203ENST00000468565 FAM98BQ52LJ0 330 aaKnown RBP13.16□□□□□ -0.3
COL27A1-203ENST00000468565 VASNQ6EMK4 673 aa13.16□□□□□ -0.3
COL27A1-203ENST00000468565 SATL1Q86VE3 508 aa13.16□□□□□ -0.3
COL27A1-203ENST00000468565 EPHX4Q8IUS5 362 aa13.16□□□□□ -0.3
COL27A1-203ENST00000468565 OR2T12Q8NG77 320 aa13.16□□□□□ -0.3
COL27A1-203ENST00000468565 LILRB4Q8NHJ6 448 aa13.16□□□□□ -0.3
COL27A1-203ENST00000468565 TFAP2CQ92754 450 aa13.16□□□□□ -0.3
COL27A1-203ENST00000468565 HOXB13Q92826 284 aaPredicted RBP13.16□□□□□ -0.3
COL27A1-203ENST00000468565 BDH2Q9BUT1 245 aa13.16□□□□□ -0.3
COL27A1-203ENST00000468565 PRDM14Q9GZV8 571 aa13.16□□□□□ -0.3
COL27A1-203ENST00000468565 C3orf14Q9HBI5 128 aa13.16□□□□□ -0.3
COL27A1-203ENST00000468565 VAPAQ9P0L0 249 aa13.16□□□□□ -0.3
COL27A1-203ENST00000468565 MRTO4Q9UKD2 239 aaKnown RBP13.16□□□□□ -0.3
COL27A1-203ENST00000468565 DOCK7Q96N67 2140 aa13.16□□□□□ -0.3
COL27A1-203ENST00000468565 NOTCH2Q04721 2471 aa13.16□□□□□ -0.3
COL27A1-203ENST00000468565 AHRRA9YTQ3 701 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 FAM47E-STBD1D6RA91 191 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 IMPDH2P12268 514 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 CYP4B1P13584 511 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 SH3BGRP55822 239 aaPredicted RBP13.15□□□□□ -0.3
COL27A1-203ENST00000468565 GAB1Q13480 694 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 APOFQ13790 326 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 TOMM20Q15388 145 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 DECR1Q16698 335 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 EIPR1Q53HC9 387 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 PLCZ1Q86YW0 608 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 KRTCAP2Q8N6L1 136 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 NATD1Q8N6N6 113 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 FAM83FQ8NEG4 500 aaPredicted RBP13.15□□□□□ -0.3
COL27A1-203ENST00000468565 NUDT8Q8WV74 236 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 ITCHQ96J02 903 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 RNF145Q96MT1 663 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 ZNF583Q96ND8 569 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 SEPHS2Q99611 448 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 TIMP4Q99727 224 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 CHID1Q9BWS9 393 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 UGT2B28Q9BY64 529 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 OR2B2Q9GZK3 357 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 OAZ3Q9UMX2 235 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 ABCG2Q9UNQ0 655 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 MAPRE3Q9UPY8 281 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 MYRFQ9Y2G1 1151 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 C19orf84I3L1E1 186 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 H6PDO95479 791 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 IL33O95760 270 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 RAP2AP10114 183 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 COX6B1P14854 86 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 EVI2BP34910 448 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 MAP3K8P41279 467 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 GAS1P54826 345 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 PSMD4P55036 377 aaKnown RBP13.15□□□□□ -0.3
COL27A1-203ENST00000468565 NR1H2P55055 460 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 CHRNB3Q05901 458 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 RUNDC3AQ59EK9 446 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 WIPI1Q5MNZ9 446 aaPredicted RBP13.15□□□□□ -0.3
COL27A1-203ENST00000468565 PM20D2Q8IYS1 436 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 ACBD4Q8NC06 268 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 POP5Q969H6 163 aaKnown RBP13.15□□□□□ -0.3
COL27A1-203ENST00000468565 RMND5BQ96G75 393 aaPredicted RBP13.15□□□□□ -0.3
COL27A1-203ENST00000468565 MS4A4EQ96PG1 132 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 GORASP2Q9H8Y8 452 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 SERHLQ9NQF3 203 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 PAPOLBQ9NRJ5 636 aaKnown RBP13.15□□□□□ -0.3
COL27A1-203ENST00000468565 ATAD3AQ9NVI7 634 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 ALKBH4Q9NXW9 302 aa13.15□□□□□ -0.3
COL27A1-203ENST00000468565 MRPS18CQ9Y3D5 142 aaKnown RBP13.15□□□□□ -0.3
COL27A1-203ENST00000468565 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms