RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 CLOCKO15516 846 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 OIP5O43482 229 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 EFNA2O43921 213 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 NID1P14543 1247 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 ADH6P28332 368 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 CAPRIN1Q14444 709 aaKnown RBP15.36■□□□□ 0.05
TRIM56-203ENST00000467847 TMEM176BQ3YBM2 270 aaPredicted RBP15.36■□□□□ 0.05
TRIM56-203ENST00000467847 CBLN3Q6UW01 205 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 FCRLAQ7L513 359 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 TDRPQ86YL5 185 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 ZNF619Q8N2I2 560 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 ATP6V1C2Q8NEY4 427 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 OR7A2PQ8NGA2 310 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 EPS8L3Q8TE67 593 aaKnown RBP15.36■□□□□ 0.05
TRIM56-203ENST00000467847 TWIST2Q8WVJ9 160 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 HOXD1Q9GZZ0 328 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 ESRP2Q9H6T0 727 aaKnown RBP15.36■□□□□ 0.05
TRIM56-203ENST00000467847 PPCSQ9HAB8 311 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 NGBQ9NPG2 151 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 ATP6V1HQ9UI12 483 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 ICAM5Q9UMF0 924 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 CARD8Q9Y2G2 431 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 GPC6Q9Y625 555 aaPredicted RBP15.36■□□□□ 0.05
TRIM56-203ENST00000467847 CADP27708 2225 aa15.36■□□□□ 0.05
TRIM56-203ENST00000467847 CHD3Q12873 2000 aaKnown RBP15.35■□□□□ 0.05
TRIM56-203ENST00000467847 NPIPA5A0A0B4J1W7 369 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 TMEM114B3SHH9 223 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 NPIPA7E9PJI5 369 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 GTPBP1O00178 669 aaKnown RBP15.35■□□□□ 0.05
TRIM56-203ENST00000467847 TRIM13O60858 407 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 PRKD3O94806 890 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 C8BP07358 591 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 CHRNGP07510 517 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 CD3EP07766 207 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 YES1P07947 543 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 NPIPA8P0DM63 369 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 MAPK1P28482 360 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 RPL3P39023 403 aaKnown RBP15.35■□□□□ 0.05
TRIM56-203ENST00000467847 P2RX1P51575 399 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 SUMO3P55854 103 aaPredicted RBP15.35■□□□□ 0.05
TRIM56-203ENST00000467847 TP53BP2Q13625 1128 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 VEZF1Q14119 521 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 TAB1Q15750 504 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 SPDYE7PQ495Y7 208 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 KLHL26Q53HC5 615 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 DCST2Q5T1A1 773 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 NCMAPQ5T1S8 102 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 SFRP5Q5T4F7 317 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 ADAM5Q6NVV9 412 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 CDC73Q6P1J9 531 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 BANPQ8N9N5 519 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 OR56A1Q8NGH5 318 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 LILRB1Q8NHL6 650 aaPredicted RBP15.35■□□□□ 0.05
TRIM56-203ENST00000467847 ADAMTS15Q8TE58 950 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 HSD17B8Q92506 261 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 KISS1RQ969F8 398 aaPredicted RBP15.35■□□□□ 0.05
TRIM56-203ENST00000467847 FBXW5Q969U6 566 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 ACTRT3Q9BYD9 372 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 GP6Q9HCN6 339 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 FAF1Q9UNN5 650 aaPredicted RBP15.35■□□□□ 0.05
TRIM56-203ENST00000467847 ACTL7BQ9Y614 415 aa15.35■□□□□ 0.05
TRIM56-203ENST00000467847 PIP5K1BO14986 540 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 ADAP00813 363 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 FGF4P08620 206 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 KRT16P08779 473 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 LAMP1P11279 417 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 PRKCAP17252 672 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 CCT3P49368 545 aaKnown RBP15.34■□□□□ 0.05
TRIM56-203ENST00000467847 P2RY6Q15077 328 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 TOMM34Q15785 309 aaPredicted RBP15.34■□□□□ 0.05
TRIM56-203ENST00000467847 CLEC12BQ2HXU8 276 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 NDUFAF6Q330K2 333 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRIM56-203ENST00000467847 HOMEZQ8IX15 550 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 ZNF614Q8N883 585 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 ZFP90Q8TF47 636 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 OR5P2Q8WZ92 322 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 GTPBP3Q969Y2 492 aaKnown RBP15.34■□□□□ 0.05
TRIM56-203ENST00000467847 TRMT61AQ96FX7 289 aaKnown RBP15.34■□□□□ 0.05
TRIM56-203ENST00000467847 PPP3R2Q96LZ3 170 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 COQ10BQ9H8M1 238 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 GIMAP2Q9UG22 337 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 TRAF6Q9Y4K3 522 aa15.34■□□□□ 0.05
TRIM56-203ENST00000467847 ABCA1O95477 2261 aa15.33■□□□□ 0.05
TRIM56-203ENST00000467847 IGHV3-15A0A0B4J1V0 119 aa15.33■□□□□ 0.04
TRIM56-203ENST00000467847 RNF223E7ERA6 249 aa15.33■□□□□ 0.04
TRIM56-203ENST00000467847 OVOL3O00110 214 aa15.33■□□□□ 0.04
TRIM56-203ENST00000467847 PEX11AO75192 247 aa15.33■□□□□ 0.04
TRIM56-203ENST00000467847 SOX30O94993 753 aa15.33■□□□□ 0.04
TRIM56-203ENST00000467847 SOD3P08294 240 aa15.33■□□□□ 0.04
TRIM56-203ENST00000467847 ENPP1P22413 925 aa15.33■□□□□ 0.04
TRIM56-203ENST00000467847 SLC7A1P30825 629 aa15.33■□□□□ 0.04
TRIM56-203ENST00000467847 ATP12AP54707 1039 aa15.33■□□□□ 0.04
TRIM56-203ENST00000467847 ITGADQ13349 1161 aa15.33■□□□□ 0.04
TRIM56-203ENST00000467847 PTGR1Q14914 329 aa15.33■□□□□ 0.04
TRIM56-203ENST00000467847 ETFDHQ16134 617 aa15.33■□□□□ 0.04
TRIM56-203ENST00000467847 UGT3A2Q3SY77 523 aa15.33■□□□□ 0.04
TRIM56-203ENST00000467847 ARL13AQ5H913 290 aaPredicted RBP15.33■□□□□ 0.04
TRIM56-203ENST00000467847 SLC43A2Q8N370 569 aa15.33■□□□□ 0.04
TRIM56-203ENST00000467847 TMCO5AQ8N6Q1 288 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms