RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 KLHL26Q53HC5 615 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 PLXDC2Q6UX71 529 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 MTERF4Q7Z6M4 381 aaKnown RBP12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 RNF130Q86XS8 419 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 MISPQ8IVT2 679 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 RFWD2Q8NHY2 731 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 PNPT1Q8TCS8 783 aaKnown RBP12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 MIPOL1Q8TD10 442 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 SMPDL3BQ92485 455 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 VPS33AQ96AX1 596 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 ITCHQ96J02 903 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 PIGQQ9BRB3 760 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 RMND5AQ9H871 391 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 CARD8Q9Y2G2 431 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 DTNAQ9Y4J8 743 aa12.68□□□□□ -0.38
CCHCR1-211ENST00000467553 FAM234BA2RU67 622 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 CLCA1A8K7I4 914 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 EEF1E1-BLOC1S5C9J1V9 151 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 LINC01387J3KSC0 135 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 SEC14L5O43304 696 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 EEF1E1O43324 174 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 OIP5O43482 229 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 NUDT14O95848 222 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 RAF1P04049 648 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 ZNF708P17019 499 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 ZNF41P51814 821 aaPredicted RBP12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 CLDN18P56856 261 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 TIGD2Q4W5G0 525 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 PDZK1Q5T2W1 519 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 FBXW10Q5XX13 1052 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 HEPHL1Q6MZM0 1159 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 PAMR1Q6UXH9 720 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 DNAJC14Q6Y2X3 702 aaPredicted RBP12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 MEIOBQ8N635 442 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 C9orf106Q8NAJ2 232 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 NRGNQ92686 78 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 ROPN1LQ96C74 230 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 KLHDC3Q9BQ90 382 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 DCTN4Q9UJW0 460 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 WDR45Q9Y484 360 aa12.67□□□□□ -0.38
CCHCR1-211ENST00000467553 A0A087WZY1 265 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 NPIPB9F8W1W9 429 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 H0YC42 278 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 HMGN4O00479 90 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 EDF1O60869 148 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 CYP7B1O75881 506 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 KRT75O95678 551 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 OPN1LWP04000 364 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 NCF2P19878 526 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 ANXA11P50995 505 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 P2RX1P51575 399 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 AGFG1P52594 562 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 SUCLG1P53597 346 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 TPD52P55327 224 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 EEFSECP57772 596 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 ZNF117Q03924 483 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 NDUFAF6Q330K2 333 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 HSP90B2PQ58FF3 399 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 COX20Q5RI15 118 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 C6orf10Q5SRN2 563 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 OR2A2Q6IF42 318 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 CBLN3Q6UW01 205 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 P4HA3Q7Z4N8 544 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 NPAS1Q99742 590 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 RBM24Q9BX46 236 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 NPHS2Q9NP85 383 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 SLC6A13Q9NSD5 602 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 MED17Q9NVC6 651 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 CCDC167Q9P0B6 97 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 STOML1Q9UBI4 398 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 NDRG3Q9UGV2 375 aa12.66□□□□□ -0.38
CCHCR1-211ENST00000467553 PRAMEF27A3QJZ7 478 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 SERINC4A6NH21 518 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 ZNF264O43296 627 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 TNFRSF21O75509 655 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 UGT2B17O75795 530 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 KLK2P20151 261 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 CLDN20P56880 219 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 HPCAP84074 193 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 FUT5Q11128 374 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 SNTB1Q13884 538 aaKnown RBP12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 ZNF141Q15928 474 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 SYPL1Q16563 259 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 AGKQ53H12 422 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 TYW3Q6IPR3 259 aaKnown RBP12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 SLC2A7Q6PXP3 512 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 MSANTD1Q6ZTZ1 278 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 HMGN2P46Q86SG4 172 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 GRAMD2AQ8IUY3 354 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 FUNDC1Q8IVP5 155 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 ARFGAP2Q8N6H7 521 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 TMCO5AQ8N6Q1 288 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 ZFP90Q8TF47 636 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 ZBTB8AQ96BR9 441 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 ZG16BQ96DA0 208 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 NMUR2Q9GZQ4 415 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 ZNF350Q9GZX5 532 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 TPT1P8Q9HAU6 139 aa12.65□□□□□ -0.38
CCHCR1-211ENST00000467553 CLCF1Q9UBD9 225 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms