RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 IFNEQ86WN2 208 aa2.4□□□□□ -2.03
ATG3-204ENST00000467275 LRRC17Q8N6Y2 441 aa2.4□□□□□ -2.03
ATG3-204ENST00000467275 MINDY2Q8NBR6 621 aa2.4□□□□□ -2.03
ATG3-204ENST00000467275 CNNM3Q8NE01 707 aa2.4□□□□□ -2.03
ATG3-204ENST00000467275 OR56B1Q8NGI3 324 aa2.4□□□□□ -2.03
ATG3-204ENST00000467275 CCDC51Q96ER9 411 aa2.4□□□□□ -2.03
ATG3-204ENST00000467275 ARHGDIGQ99819 225 aa2.4□□□□□ -2.03
ATG3-204ENST00000467275 ATG10Q9H0Y0 220 aa2.4□□□□□ -2.03
ATG3-204ENST00000467275 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.4□□□□□ -2.03
ATG3-204ENST00000467275 ANKMY1Q9P2S6 941 aa2.4□□□□□ -2.03
ATG3-204ENST00000467275 GHRLQ9UBU3 117 aa2.4□□□□□ -2.03
ATG3-204ENST00000467275 IL20RAQ9UHF4 553 aa2.4□□□□□ -2.03
ATG3-204ENST00000467275 DCDC2Q9UHG0 476 aa2.4□□□□□ -2.03
ATG3-204ENST00000467275 ERVW-1Q9UQF0 538 aa2.4□□□□□ -2.03
ATG3-204ENST00000467275 RAD54L2Q9Y4B4 1467 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 SLC35G4P0C7Q5 338 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 THRBP10828 461 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 PRDX6P30041 224 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 CD86P42081 329 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 CAMLGP49069 296 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 NUMBP49757 651 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 CCR6P51684 374 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 SLAQ13239 276 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 SNX1Q13596 522 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 NSDHLQ15738 373 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 CARTPTQ16568 116 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 ACSF3Q4G176 576 aaPredicted RBP2.39□□□□□ -2.03
ATG3-204ENST00000467275 AGKQ53H12 422 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 LEG1Q6P5S2 330 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 BTNL3Q6UXE8 466 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 RBM43Q6ZSC3 357 aaKnown RBP2.39□□□□□ -2.03
ATG3-204ENST00000467275 FAM220AQ7Z4H9 259 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 P4HA3Q7Z4N8 544 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 CCDC36Q8IYA8 594 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 RNF148Q8N7C7 305 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 FAM210BQ96KR6 192 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 KCNK16Q96T55 309 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 SOHLH2Q9NX45 425 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 HOOK1Q9UJC3 728 aaKnown RBP2.39□□□□□ -2.03
ATG3-204ENST00000467275 TBX21Q9UL17 535 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 PLA2G4CQ9UP65 541 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 NUDCQ9Y266 331 aa2.39□□□□□ -2.03
ATG3-204ENST00000467275 A0A096LNJ9 63 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 K7N7A8 449 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 PES1O00541 588 aaKnown RBP2.38□□□□□ -2.03
ATG3-204ENST00000467275 RASGRF2O14827 1237 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 SLC25A27O95847 323 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 ZCCHC18P0CG32 403 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 RALAP11233 206 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 ADRB3P13945 408 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 AQP1P29972 269 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 PRDX3P30048 256 aaKnown RBP2.38□□□□□ -2.03
ATG3-204ENST00000467275 PRDX2P32119 198 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 DLSTP36957 453 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 ASMTP46597 345 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 LIM2P55344 173 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 MYBPC1Q00872 1141 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 FUT7Q11130 342 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 ZP4Q12836 540 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 PDIA5Q14554 519 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 LRIT3Q3SXY7 679 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 C12orf60Q5U649 245 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 IL23RQ5VWK5 629 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 LIPKQ5VXJ0 399 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 STAC2Q6ZMT1 411 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 GOLGA7Q7Z5G4 137 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 FAM71CQ8NEG0 241 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 OR51G1Q8NGK1 321 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 OR9A4Q8NGU2 314 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 OR1E3Q8WZA6 343 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 PIGCQ92535 297 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 PHYHIPQ92561 330 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 NDUFAF3Q9BU61 184 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 KRT23Q9C075 422 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 TMEM231Q9H6L2 316 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 CNOT2Q9NZN8 540 aaKnown RBP2.38□□□□□ -2.03
ATG3-204ENST00000467275 CLCA3PQ9Y6N3 262 aa2.38□□□□□ -2.03
ATG3-204ENST00000467275 FBLL1A6NHQ2 334 aaKnown RBP2.37□□□□□ -2.03
ATG3-204ENST00000467275 ARF4P18085 180 aaPredicted RBP2.37□□□□□ -2.03
ATG3-204ENST00000467275 DNAJB1P25685 340 aa2.37□□□□□ -2.03
ATG3-204ENST00000467275 HSPA1LP34931 641 aa2.37□□□□□ -2.03
ATG3-204ENST00000467275 RPS9P46781 194 aaKnown RBP2.37□□□□□ -2.03
ATG3-204ENST00000467275 HERVK_113P63132 956 aa2.37□□□□□ -2.03
ATG3-204ENST00000467275 ERVK-8P63133 956 aa2.37□□□□□ -2.03
ATG3-204ENST00000467275 GABPB1Q06547 395 aaPredicted RBP2.37□□□□□ -2.03
ATG3-204ENST00000467275 MADCAM1Q13477 382 aa2.37□□□□□ -2.03
ATG3-204ENST00000467275 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
ATG3-204ENST00000467275 PAQR9Q6ZVX9 377 aa2.37□□□□□ -2.03
ATG3-204ENST00000467275 OR52I1Q8NGK6 324 aa2.37□□□□□ -2.03
ATG3-204ENST00000467275 WDR36Q8NI36 951 aaKnown RBP2.37□□□□□ -2.03
ATG3-204ENST00000467275 ZNF596Q8TC21 504 aa2.37□□□□□ -2.03
ATG3-204ENST00000467275 SLC22A8Q8TCC7 542 aa2.37□□□□□ -2.03
ATG3-204ENST00000467275 TRUB1Q8WWH5 349 aaKnown RBP2.37□□□□□ -2.03
ATG3-204ENST00000467275 RNF185Q96GF1 192 aa2.37□□□□□ -2.03
ATG3-204ENST00000467275 WRAP53Q9BUR4 548 aaKnown RBP2.37□□□□□ -2.03
ATG3-204ENST00000467275 ERVK-6Q9BXR3 956 aa2.37□□□□□ -2.03
ATG3-204ENST00000467275 NGBQ9NPG2 151 aa2.37□□□□□ -2.03
ATG3-204ENST00000467275 ACTR3BQ9P1U1 418 aa2.37□□□□□ -2.03
ATG3-204ENST00000467275 ZNF490Q9ULM2 529 aaPredicted RBP2.37□□□□□ -2.03
ATG3-204ENST00000467275 MAB21L2Q9Y586 359 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms