RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 FLRT2O43155 660 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 NMBP08949 121 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 SNRPBP14678 240 aaKnown RBP18.35■□□□□ 0.53
SDF4-205ENST00000465727 CXCL2P19875 107 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 HSD17B2P37059 387 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 PRR5P85299 388 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 CAMK1Q14012 370 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 UBE2NLQ5JXB2 153 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 C6orf132Q5T0Z8 1188 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 UBE3DQ7Z6J8 389 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 NAXDQ8IW45 347 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 OR2L2Q8NH16 312 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 GANCQ8TET4 914 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 SCARB1Q8WTV0 552 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 THAP4Q8WY91 577 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 KLK6Q92876 244 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 PELOQ9BRX2 385 aaKnown RBP18.35■□□□□ 0.53
SDF4-205ENST00000465727 NKIRAS2Q9NYR9 191 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 IL20RAQ9UHF4 553 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 FBXL3Q9UKT7 428 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 ZMIZ1Q9ULJ6 1067 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 A0A1B0GTQ1 180 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 NTN1O95631 604 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 SOD2P04179 222 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 IFNGR1P15260 489 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 Q6ZTK2 550 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 C17orf47Q8NEP4 570 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 TMEM255BQ8WV15 326 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 DTD2Q96FN9 168 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 LRIG1Q96JA1 1093 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 HHIPL1Q96JK4 782 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 OR7D2Q96RA2 312 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 MCHR1Q99705 422 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 SARGQ9BW04 601 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 BEX1Q9HBH7 125 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 MGAT4CQ9UBM8 478 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 IL36AQ9UHA7 158 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 CLEC4AQ9UMR7 237 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 CA5BQ9Y2D0 317 aa18.35■□□□□ 0.53
SDF4-205ENST00000465727 SLC22A23A1A5C7 686 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 FAM86C2PA6NEL3 165 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 PRR23D1E9PI22 279 aaPredicted RBP18.34■□□□□ 0.53
SDF4-205ENST00000465727 LEFTY2O00292 366 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 CDC42EP2O14613 210 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 PIP5K1CO60331 668 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 OR2A4O95047 310 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 FGF2P09038 288 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 PRR23D2P0DMB1 279 aaPredicted RBP18.34■□□□□ 0.53
SDF4-205ENST00000465727 VEGFCP49767 419 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 ACTC1P68032 377 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 ACTA1P68133 377 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 RPL13AP3Q6NVV1 102 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 GLDNQ6ZMI3 551 aaPredicted RBP18.34■□□□□ 0.53
SDF4-205ENST00000465727 HSD17B13Q7Z5P4 300 aaPredicted RBP18.34■□□□□ 0.53
SDF4-205ENST00000465727 LNX2Q8N448 690 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 EIF4E3Q8N5X7 224 aaKnown RBP18.34■□□□□ 0.53
SDF4-205ENST00000465727 FBXW5Q969U6 566 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 C4orf36Q96KX1 117 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 OR2A7Q96R45 310 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 OR52D1Q9H346 318 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 MTG2Q9H4K7 406 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 HRASLSQ9HDD0 168 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 PIPOXQ9P0Z9 390 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 GPR34Q9UPC5 381 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 UNC119BA6NIH7 251 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 MCRIP1C9JLW8 97 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 BHLHE40O14503 412 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 GALR3O60755 368 aaPredicted RBP18.34■□□□□ 0.53
SDF4-205ENST00000465727 ZGLP1P0C6A0 271 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 SSR2P43308 183 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 CFAP77Q6ZQR2 320 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 GAREM2Q75VX8 874 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 C2orf73Q8N5S3 287 aaPredicted RBP18.34■□□□□ 0.53
SDF4-205ENST00000465727 OR4D9Q8NGE8 314 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 FANK1Q8TC84 345 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 KAT2AQ92830 837 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 ELP4Q96EB1 424 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 OR52A5Q9H2C5 316 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 SLC6A15Q9H2J7 730 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 AUNIPQ9H7T9 357 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 GPN1Q9HCN4 374 aaPredicted RBP18.34■□□□□ 0.53
SDF4-205ENST00000465727 PLAGL1Q9UM63 463 aa18.34■□□□□ 0.53
SDF4-205ENST00000465727 FEZF1A0PJY2 475 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 RFXAPO00287 272 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 TMEM127O75204 238 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 POP7O75817 140 aaKnown RBP18.33■□□□□ 0.52
SDF4-205ENST00000465727 THY1P04216 161 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 ATP1B1P05026 303 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 BMP7P18075 431 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 OVCH1Q7RTY7 1134 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 OR5AR1Q8NGP9 310 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 SLC2A12Q8TD20 617 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 GHSRQ92847 366 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 CHIAQ9BZP6 476 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 IFT46Q9NQC8 304 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 CMC2Q9NRP2 79 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 FBXO9Q9UK97 447 aaPredicted RBP18.33■□□□□ 0.52
SDF4-205ENST00000465727 RCE1Q9Y256 329 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 KCNE3Q9Y6H6 103 aa18.33■□□□□ 0.52
SDF4-205ENST00000465727 MYOFQ9NZM1 2061 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms