RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 TSPEARQ8WU66 669 aa6.95□□□□□ -1.3
THBS3-205ENST00000465596 XAGE5Q8WWM1 108 aa6.95□□□□□ -1.3
THBS3-205ENST00000465596 MAL2Q969L2 176 aa6.95□□□□□ -1.3
THBS3-205ENST00000465596 SH3YL1Q96HL8 342 aaPredicted RBP6.95□□□□□ -1.3
THBS3-205ENST00000465596 TRIM8Q9BZR9 551 aa6.95□□□□□ -1.3
THBS3-205ENST00000465596 HOXD1Q9GZZ0 328 aa6.95□□□□□ -1.3
THBS3-205ENST00000465596 LDAHQ9H6V9 325 aa6.95□□□□□ -1.3
THBS3-205ENST00000465596 RMND5AQ9H871 391 aa6.95□□□□□ -1.3
THBS3-205ENST00000465596 BCL2L10Q9HD36 194 aa6.95□□□□□ -1.3
THBS3-205ENST00000465596 A4GALTQ9NPC4 353 aa6.95□□□□□ -1.3
THBS3-205ENST00000465596 EXOSC3Q9NQT5 275 aaKnown RBP6.95□□□□□ -1.3
THBS3-205ENST00000465596 NPDC1Q9NQX5 325 aaPredicted RBP6.95□□□□□ -1.3
THBS3-205ENST00000465596 DNAJB12Q9NXW2 375 aaKnown RBP6.95□□□□□ -1.3
THBS3-205ENST00000465596 SUCOQ9UBS9 1254 aaKnown RBP6.95□□□□□ -1.3
THBS3-205ENST00000465596 PCDHGB4Q9UN71 923 aa6.95□□□□□ -1.3
THBS3-205ENST00000465596 LIPT1Q9Y234 373 aa6.95□□□□□ -1.3
THBS3-205ENST00000465596 CARD8Q9Y2G2 431 aa6.95□□□□□ -1.3
THBS3-205ENST00000465596 RPH3AQ9Y2J0 694 aaPredicted RBP6.95□□□□□ -1.3
THBS3-205ENST00000465596 WDR45Q9Y484 360 aa6.95□□□□□ -1.3
THBS3-205ENST00000465596 PLCE1Q9P212 2302 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 A0A087WZY1 265 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 AHRRA9YTQ3 701 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 ZNF264O43296 627 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 EIF4E2O60573 245 aaKnown RBP6.94□□□□□ -1.3
THBS3-205ENST00000465596 KRT75O95678 551 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 VIMP08670 466 aaKnown RBP6.94□□□□□ -1.3
THBS3-205ENST00000465596 HOXD4P09016 255 aaPredicted RBP6.94□□□□□ -1.3
THBS3-205ENST00000465596 TROVE2P10155 538 aaKnown RBP eCLIP6.94□□□□□ -1.3
THBS3-205ENST00000465596 ARAFP10398 606 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 UBL4AP11441 157 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 GABRA1P14867 456 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 HK1P19367 917 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 ATP6V1C1P21283 382 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 TCEA1P23193 301 aaKnown RBP6.94□□□□□ -1.3
THBS3-205ENST00000465596 COL8A1P27658 744 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 LSP1P33241 339 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 PTGER4P35408 488 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 TIMP3P35625 211 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 P2RX1P51575 399 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 ZNF136P52737 540 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 ARFIP2P53365 341 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 PER3P56645 1201 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 PCBP3P57721 371 aaKnown RBP6.94□□□□□ -1.3
THBS3-205ENST00000465596 DSTNP60981 165 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 PMPCAQ10713 525 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 FOXF1Q12946 379 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 KLF10Q13118 480 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 FADDQ13158 208 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 GPR68Q15743 365 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 RUNDC3AQ59EK9 446 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 RPS26P11Q5JNZ5 115 aaPredicted RBP6.94□□□□□ -1.3
THBS3-205ENST00000465596 C6orf10Q5SRN2 563 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 RIPPLY2Q5TAB7 128 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 RNF220Q5VTB9 566 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 PRAMEF8Q5VWM4 474 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 PRAMEF7Q5VXH5 474 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 C8orf82Q6P1X6 216 aaPredicted RBP6.94□□□□□ -1.3
THBS3-205ENST00000465596 ZNF585AQ6P3V2 769 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 MTFR2Q6P444 385 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 XKRXQ6PP77 449 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 B3GNT6Q6ZMB0 384 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 C16orf62Q7Z3J2 963 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 TREML1Q86YW5 311 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 LACC1Q8IV20 430 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 CCDC71Q8IV32 467 aaPredicted RBP6.94□□□□□ -1.3
THBS3-205ENST00000465596 PM20D2Q8IYS1 436 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 ZNF527Q8NB42 609 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 OR5W2Q8NH69 310 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 B4GALNT2Q8NHY0 566 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 PHOSPHO1Q8TCT1 267 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 CNOT9Q92600 299 aaKnown RBP6.94□□□□□ -1.3
THBS3-205ENST00000465596 ZBTB8AQ96BR9 441 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 TMEM19Q96HH6 336 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 RNF145Q96MT1 663 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 SFXN2Q96NB2 322 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 ANKRD27Q96NW4 1050 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 LAT2Q9GZY6 243 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 MYLK2Q9H1R3 596 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 TMEM38AQ9H6F2 299 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 COQ10BQ9H8M1 238 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 SDHAF3Q9NRP4 125 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 EXD2Q9NVH0 621 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 JKAMPQ9P055 326 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 DKKL1Q9UK85 242 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 ACAD8Q9UKU7 415 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 TRIM33Q9UPN9 1127 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 VDAC3Q9Y277 283 aa6.94□□□□□ -1.3
THBS3-205ENST00000465596 KLF2Q9Y5W3 355 aaPredicted RBP6.94□□□□□ -1.3
THBS3-205ENST00000465596 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.93□□□□□ -1.3
THBS3-205ENST00000465596 A0A0J9YW62 118 aa6.93□□□□□ -1.3
THBS3-205ENST00000465596 CDHR4A6H8M9 788 aa6.93□□□□□ -1.3
THBS3-205ENST00000465596 CLCA1A8K7I4 914 aa6.93□□□□□ -1.3
THBS3-205ENST00000465596 TMEM229AB2RXF0 380 aa6.93□□□□□ -1.3
THBS3-205ENST00000465596 LINC01387J3KSC0 135 aa6.93□□□□□ -1.3
THBS3-205ENST00000465596 FAAHO00519 579 aa6.93□□□□□ -1.3
THBS3-205ENST00000465596 AP3D1O14617 1153 aa6.93□□□□□ -1.3
THBS3-205ENST00000465596 ADAMDEC1O15204 470 aa6.93□□□□□ -1.3
THBS3-205ENST00000465596 GMFGO60234 142 aa6.93□□□□□ -1.3
THBS3-205ENST00000465596 TNFSF13O75888 250 aa6.93□□□□□ -1.3
THBS3-205ENST00000465596 CLDN14O95500 239 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms