RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 RAPSNQ13702 412 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 VEZF1Q14119 521 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 HERC3Q15034 1050 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 CYTH1Q15438 398 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 TRADDQ15628 312 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 NPTX1Q15818 432 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 PHKG1Q16816 387 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 MAJINQ3KP22 176 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 ITPRIPL2Q3MIP1 535 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 XKR4Q5GH76 650 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 THEM4Q5T1C6 240 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 C6orf183Q5T699 404 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 DHRS4L2Q6PKH6 230 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 CEACAM20Q6UY09 585 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 LINGO4Q6UY18 593 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 FAM47EQ6ZV65 393 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 USP43Q70EL4 1123 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 DET1Q7L5Y6 550 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 BHLHA9Q7RTU4 235 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 HDDC2Q7Z4H3 204 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 GPR141Q7Z602 305 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 SLFN11Q7Z7L1 901 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 TRPT1Q86TN4 253 aaKnown RBP4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 LRRC6Q86X45 466 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 CBWD2Q8IUF1 395 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 CDKL3Q8IVW4 592 aaPredicted RBP4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 DCUN1D3Q8IWE4 304 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 GPR65Q8IYL9 337 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 EID3Q8N140 333 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 RNF149Q8NC42 400 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 CAMKVQ8NCB2 501 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 KBTBD8Q8NFY9 601 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 ASZ1Q8WWH4 475 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 TM9SF4Q92544 642 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 SIPA1Q96FS4 1042 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 SENP5Q96HI0 755 aaPredicted RBP4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 NSL1Q96IY1 281 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 FAM71F1Q96KD3 344 aaPredicted RBP4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 FER1L6-AS2Q96M78 137 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 PGLYRP2Q96PD5 576 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 UHRF2Q96PU4 802 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 VPS35Q96QK1 796 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 FEVQ99581 238 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 CITED2Q99967 270 aaPredicted RBP4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 P2RY13Q9BPV8 354 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 GPR61Q9BZJ8 451 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 PLA2G12AQ9BZM1 189 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 FAM49AQ9H0Q0 323 aaPredicted RBP4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 MINDY3Q9H8M7 445 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 GORASP2Q9H8Y8 452 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 MRPS30Q9NP92 439 aaKnown RBP4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 DDX28Q9NUL7 540 aaKnown RBP4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 TBC1D13Q9NVG8 400 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 FAM153AQ9UHL3 310 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 CPSF3Q9UKF6 684 aaKnown RBP4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 MMP17Q9ULZ9 603 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 ERVK-19Q9WJR5 959 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 PPP2R2CQ9Y2T4 447 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 TMED3Q9Y3Q3 217 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 NME7Q9Y5B8 376 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 SONP18583 2426 aaKnown RBP4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 HERC2O95714 4834 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 A0A087WYN8 130 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 IGLV9-49A0A0B4J1Y8 123 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 ZSCAN5BA6NJL1 495 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 ZNF233A6NK53 670 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 TCP11X1B4DZS4 312 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 SLC22A2O15244 555 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 OGTO15294 1046 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 PRPSAP2O60256 369 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 MYO1DO94832 1006 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 FAM107AO95990 144 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 IGHV2-70P01814 119 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 SERPING1P05155 500 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 FRMD6-AS1P0C7T7 363 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 IGHV4-38-2P0DP08 117 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 CLUP10909 449 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 SLC2A3P11169 496 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 RBMS1P29558 406 aaKnown RBP4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 SLC6A6P31641 620 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 AP2S1P53680 142 aaPredicted RBP4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 RAD23AP54725 363 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 AIF1P55008 147 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 CDH6P55285 790 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 NLRP11P59045 1033 aaKnown RBP4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 RPL10AP62906 217 aaKnown RBP4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 ARF5P84085 180 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 HTD2P86397 168 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 FADDQ13158 208 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 STX3Q13277 289 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 TFDP1Q14186 410 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 RFTN1Q14699 578 aaPredicted RBP4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 MTF1Q14872 753 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 ZBTB6Q15916 424 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 KYAT1Q16773 422 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 GTDC1Q4AE62 458 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 TCHHL1Q5QJ38 904 aaPredicted RBP4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 SLC35E4Q6ICL7 350 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 SPOPLQ6IQ16 392 aa4.44□□□□□ -1.7
CACNA1C-223ENST00000465278 NIPAL1Q6NVV3 410 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms