RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 SLC38A1Q9H2H9 487 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 TAS2R1Q9NYW7 299 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 COQ3Q9NZJ6 369 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 PPP4R1LQ9P1A2 415 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 WIF1Q9Y5W5 379 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 POLQO75417 2590 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 DSPPQ9NZW4 1301 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 CACNA1CQ13936 2221 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 FAM47E-STBD1D6RA91 191 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 EIF4E2O60573 245 aaKnown RBP15.88■□□□□ 0.13
CPSF4-209ENST00000465132 CBR3O75828 277 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 DNAJC8O75937 253 aaPredicted RBP15.88■□□□□ 0.13
CPSF4-209ENST00000465132 ANGPTL1O95841 491 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 CHRM4P08173 479 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 NUDT7P0C024 238 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 CCL3P10147 92 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 GCKP35557 465 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 CPOXP36551 454 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 RFC3P40938 356 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 PLGLB1Q02325 96 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 TLE4Q04727 773 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 FUT5Q11128 374 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 KLHL26Q53HC5 615 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 CMPK2Q5EBM0 449 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 RINLQ6ZS11 566 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 CCDC80Q76M96 950 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 YTHDF3Q7Z739 585 aaKnown RBP15.88■□□□□ 0.13
CPSF4-209ENST00000465132 SLC22A16Q86VW1 577 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 PTOV1Q86YD1 416 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 OR2M7Q8NG81 312 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 OR1J4Q8NGS1 313 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 OR4C3Q8NH37 302 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 OR52P1PQ8NH57 321 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 RNF138Q8WVD3 245 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 MAL2Q969L2 176 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 NODALQ96S42 347 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 MCCC2Q9HCC0 563 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 ZFP64Q9NPA5 681 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 MAGEL2Q9UJ55 1249 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 DCHS2Q6V1P9 2916 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 CCDC168Q8NDH2 2452 aa15.88■□□□□ 0.13
CPSF4-209ENST00000465132 SERINC4A6NH21 518 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 NPIPB9F8W1W9 429 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 UGT2B17O75795 530 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 TPOP07202 933 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 NID1P14543 1247 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 ME2P23368 584 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 PRKAR1BP31321 381 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 GSK3BP49841 420 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 GZMMP51124 257 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 KCNJ10P78508 379 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 GTF3C1Q12789 2109 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 TESK1Q15569 626 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 ZNF311Q5JNZ3 666 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 PRAMEF20Q5VT98 475 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 MEX3BQ6ZN04 569 aaKnown RBP15.87■□□□□ 0.13
CPSF4-209ENST00000465132 CD163Q86VB7 1156 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 ARMC8Q8IUR7 673 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 MARVELD2Q8N4S9 558 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 ZFP62Q8NB50 900 aaPredicted RBP15.87■□□□□ 0.13
CPSF4-209ENST00000465132 TOR1AIP2Q8NFQ8 470 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 PHOSPHO1Q8TCT1 267 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 SLC35B4Q969S0 331 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 PIF1Q9H611 641 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 FBXO34Q9NWN3 711 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 ADPRHL2Q9NX46 363 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 QPCTLQ9NXS2 382 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 BAG5Q9UL15 447 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 HRH3Q9Y5N1 445 aa15.87■□□□□ 0.13
CPSF4-209ENST00000465132 GPC6Q9Y625 555 aaPredicted RBP15.87■□□□□ 0.13
CPSF4-209ENST00000465132 ADGRG4Q8IZF6 3080 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 ZNF264O43296 627 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 SCO2O43819 266 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 CDC40O60508 579 aaKnown RBP eCLIP15.86■□□□□ 0.13
CPSF4-209ENST00000465132 CSTAP01040 98 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 PABPC4LP0CB38 370 aaKnown RBP15.86■□□□□ 0.13
CPSF4-209ENST00000465132 UBL4AP11441 157 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 SLC6A8P48029 635 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 SUMO3P55854 103 aaPredicted RBP15.86■□□□□ 0.13
CPSF4-209ENST00000465132 FGFBP1Q14512 234 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 GANABQ14697 944 aaKnown RBP15.86■□□□□ 0.13
CPSF4-209ENST00000465132 PDZK1Q5T2W1 519 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 RNF220Q5VTB9 566 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 TIGD3Q6B0B8 471 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 GALNT10Q86SR1 603 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 CDH24Q86UP0 819 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 PLCZ1Q86YW0 608 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 OR4K17Q8NGC6 315 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 JSRP1Q96MG2 331 aaPredicted RBP15.86■□□□□ 0.13
CPSF4-209ENST00000465132 TRIM15Q9C019 465 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 PLSCR2Q9NRY7 297 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 RPS6KA6Q9UK32 745 aa15.86■□□□□ 0.13
CPSF4-209ENST00000465132 PRAMEF27A3QJZ7 478 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 CXCR6O00574 342 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 SNPHO15079 494 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 TRIM3O75382 744 aaPredicted RBP15.85■□□□□ 0.13
CPSF4-209ENST00000465132 C1QCP02747 245 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 C8BP07358 591 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 RPS4Y1P22090 263 aaKnown RBP15.85■□□□□ 0.13
CPSF4-209ENST00000465132 KDELR2P33947 212 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms