RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 C11orf65Q8NCR3 313 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 SFXN2Q96NB2 322 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 PRR14Q9BWN1 585 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 TMEM38AQ9H6F2 299 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 MTHFD2LQ9H903 347 aaPredicted RBP10.76□□□□□ -0.69
APTX-213ENST00000465003 MED17Q9NVC6 651 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 DNAJB12Q9NXW2 375 aaKnown RBP10.76□□□□□ -0.69
APTX-213ENST00000465003 ADA2Q9NZK5 511 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 ACAD8Q9UKU7 415 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 GMEB1Q9Y692 573 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 FASNP49327 2511 aaKnown RBP10.76□□□□□ -0.69
APTX-213ENST00000465003 MYO7BQ6PIF6 2116 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 POLEQ07864 2286 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 H3BNH8 94 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 SEC14L5O43304 696 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 SEMA7AO75326 666 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 UBR5O95071 2799 aaPredicted RBP10.76□□□□□ -0.69
APTX-213ENST00000465003 EPPINO95925 133 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 PABPC4LP0CB38 370 aaKnown RBP10.76□□□□□ -0.69
APTX-213ENST00000465003 ESRRAP11474 423 aaPredicted RBP10.76□□□□□ -0.69
APTX-213ENST00000465003 NID1P14543 1247 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 NCK1P16333 377 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 BMP7P18075 431 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 TNFRSF1BP20333 461 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 PTNP21246 168 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 LCN1P31025 176 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 PTGS2P35354 604 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 P2RX1P51575 399 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 ZNF41P51814 821 aaPredicted RBP10.76□□□□□ -0.69
APTX-213ENST00000465003 DSCR4P56555 118 aaPredicted RBP10.76□□□□□ -0.69
APTX-213ENST00000465003 LIPEQ05469 1076 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 ZNF630Q2M218 657 aaPredicted RBP10.76□□□□□ -0.69
APTX-213ENST00000465003 VMACQ2NL98 169 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 PLPPR5Q32ZL2 321 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 EMC4Q5J8M3 183 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 ZNF585AQ6P3V2 769 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 RINLQ6ZS11 566 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 EIF3MQ7L2H7 374 aaKnown RBP10.76□□□□□ -0.69
APTX-213ENST00000465003 TRPM8Q7Z2W7 1104 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 SERPINA11Q86U17 422 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 CALHM3Q86XJ0 350 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 GALNT11Q8NCW6 608 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 HIPK4Q8NE63 616 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 ATP6V1C2Q8NEY4 427 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 OR2T12Q8NG77 320 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 RNF145Q96MT1 663 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 UGT2B28Q9BY64 529 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 OR2B2Q9GZK3 357 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 PTGES2Q9H7Z7 377 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 POLE3Q9NRF9 147 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 ETAA1Q9NY74 926 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 EGFL7Q9UHF1 273 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 ANGPT4Q9Y264 503 aa10.76□□□□□ -0.69
APTX-213ENST00000465003 MYO18BQ8IUG5 2567 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 ADGRG4Q8IZF6 3080 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 A0A0G2JPF8 293 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 OR2M5A3KFT3 312 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 HNRNPCL2B2RXH8 293 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 HNRNPCL3B7ZW38 293 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 HNRNPCL1O60812 293 aaKnown RBP10.75□□□□□ -0.69
APTX-213ENST00000465003 DBIP07108 87 aaKnown RBP10.75□□□□□ -0.69
APTX-213ENST00000465003 RNF224P0DH78 156 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 HNRNPCL4P0DMR1 293 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 GFRA1P56159 465 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 B3GALT5-AS1P59052 145 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 EEF1A1P68104 462 aaKnown RBP10.75□□□□□ -0.69
APTX-213ENST00000465003 CRYZQ08257 329 aaKnown RBP10.75□□□□□ -0.69
APTX-213ENST00000465003 QPRTQ15274 297 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 DUSP7Q16829 419 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 LRRC23Q53EV4 343 aaPredicted RBP10.75□□□□□ -0.69
APTX-213ENST00000465003 KRTCAP3Q53RY4 240 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 NET1Q7Z628 596 aaPredicted RBP10.75□□□□□ -0.69
APTX-213ENST00000465003 DEFB107AQ8IZN7 70 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 RBM15BQ8NDT2 890 aaKnown RBP10.75□□□□□ -0.69
APTX-213ENST00000465003 BBS10Q8TAM1 723 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 POC1BQ8TC44 478 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 GPR119Q8TDV5 335 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 TAMM41Q96BW9 452 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 TIMP4Q99727 224 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 ACKR4Q9NPB9 350 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 THUMPD1Q9NXG2 353 aaKnown RBP10.75□□□□□ -0.69
APTX-213ENST00000465003 CALML5Q9NZT1 146 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 ZNF337Q9Y3M9 751 aa10.75□□□□□ -0.69
APTX-213ENST00000465003 GPC6Q9Y625 555 aaPredicted RBP10.75□□□□□ -0.69
APTX-213ENST00000465003 HELZ2Q9BYK8 2649 aaKnown RBP10.75□□□□□ -0.69
APTX-213ENST00000465003 DIDO1Q9BTC0 2240 aaKnown RBP10.74□□□□□ -0.69
APTX-213ENST00000465003 IGLV3-32A0A0A0MS00 114 aa10.74□□□□□ -0.69
APTX-213ENST00000465003 CDHR4A6H8M9 788 aa10.74□□□□□ -0.69
APTX-213ENST00000465003 PRORSD1PA6NEY8 169 aa10.74□□□□□ -0.69
APTX-213ENST00000465003 B2RBV5 119 aa10.74□□□□□ -0.69
APTX-213ENST00000465003 M0QX08 132 aa10.74□□□□□ -0.69
APTX-213ENST00000465003 LRRTM2O43300 516 aa10.74□□□□□ -0.69
APTX-213ENST00000465003 NPPAP01160 153 aa10.74□□□□□ -0.69
APTX-213ENST00000465003 LINGO3P0C6S8 592 aa10.74□□□□□ -0.69
APTX-213ENST00000465003 CCNA2P20248 432 aa10.74□□□□□ -0.69
APTX-213ENST00000465003 SHC1P29353 583 aa10.74□□□□□ -0.69
APTX-213ENST00000465003 PCGF2P35227 344 aa10.74□□□□□ -0.69
APTX-213ENST00000465003 GSK3BP49841 420 aa10.74□□□□□ -0.69
APTX-213ENST00000465003 CLDN20P56880 219 aa10.74□□□□□ -0.69
APTX-213ENST00000465003 PCBP3P57721 371 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms