RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 FLRT3Q9NZU0 649 aa17.3■□□□□ 0.36
TSPAN4-210ENST00000464987 POU2F3Q9UKI9 436 aa17.3■□□□□ 0.36
TSPAN4-210ENST00000464987 SIRT4Q9Y6E7 314 aaPredicted RBP17.3■□□□□ 0.36
TSPAN4-210ENST00000464987 MPDZO75970 2070 aa17.3■□□□□ 0.36
TSPAN4-210ENST00000464987 A0A0A6YYC8 382 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 TRDV1A0A1B0GX56 115 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 C12orf71A8MTZ7 269 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 I3L1I5 382 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 GABRPO00591 440 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 CHST10O43529 356 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 APOA1P02647 267 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 ATXN8OSP0DMR3 200 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 CLUP10909 449 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 CASP3P42574 277 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 NKX2-5P52952 324 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 RAB38P57729 211 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 NIPAL3Q6P499 406 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 ZNF322Q6U7Q0 402 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 VWA5B2Q8N398 1253 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 ARHGEF39Q8N4T4 335 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 SMRP1Q8NCR6 262 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 OR51A7Q8NH64 312 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 PTP4A1Q93096 173 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 BPIFA2Q96DR5 249 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 GPR174Q9BXC1 333 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 KRCC1Q9NPI7 259 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 HCN3Q9P1Z3 774 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 NDRG2Q9UN36 371 aaKnown RBP17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 GSTK1Q9Y2Q3 226 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 KIR2DS5A0A0G2JLQ3 304 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 A0A0G2JNG1 304 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 B4DGG1 531 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 KIR2DS3K7RE56 304 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 CASKO14936 926 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 REM1O75628 298 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 NGFRP08138 427 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 SAGP10523 405 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 S1PR1P21453 382 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 NOS3P29474 1203 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 FAM53BQ14153 422 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 KIR2DS5Q14953 304 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 KLHL12Q53G59 568 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 OOSP2Q86WS3 158 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 MARCH9Q86YJ5 346 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 FAM160A2Q8N612 972 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 FAM181AQ8N9Y4 354 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 OR52L1Q8NGH7 329 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 C17orf50Q8WW18 174 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 KISS1RQ969F8 398 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 C8orf33Q9H7E9 229 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 COMMD3Q9UBI1 195 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 FBXL4Q9UKA2 621 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 SIGLEC7Q9Y286 467 aa17.29■□□□□ 0.36
TSPAN4-210ENST00000464987 FAM221BA6H8Z2 402 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 FABP12A6NFH5 140 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 OR10H2O60403 315 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 NKX2-2O95096 273 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 CTSEP14091 401 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 IL9P15248 144 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 BMP7P18075 431 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 MAT1AQ00266 395 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 FOXK2Q01167 660 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 ZCCHC12Q6PEW1 402 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 RNF113BQ8IZP6 322 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 RLN3Q8WXF3 142 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 TMCO6Q96DC7 493 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 HRO43593 1189 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 AKAP8O43823 692 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 MRPL3P09001 348 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 CSF3P09919 207 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 MAZP56270 477 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 KRR1Q13601 381 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 KCNJ8Q15842 424 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 NNATQ16517 81 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 AMZ1Q400G9 498 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 MANEAQ5SRI9 462 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 ZNF362Q5T0B9 420 aaPredicted RBP17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 KIAA0895LQ68EN5 471 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 TMEM91Q6ZNR0 172 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 LNX2Q8N448 690 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 OR52N1Q8NH53 320 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 ZDHHC1Q8WTX9 485 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 IFT27Q9BW83 186 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 POMT2Q9UKY4 750 aa17.28■□□□□ 0.36
TSPAN4-210ENST00000464987 SLC9B1P1A6NJY1 282 aa17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 SLC35E2P0CK97 266 aa17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 DRD5P21918 477 aa17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 PAICSP22234 425 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 DAB2P98082 770 aa17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 TMEM44Q2T9K0 475 aa17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 ARMC4Q5T2S8 1044 aa17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 DDI2Q5TDH0 399 aa17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 PRPF38BQ5VTL8 546 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 GARNL3Q5VVW2 1013 aa17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 UTS2BQ765I0 119 aa17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 MEPCEQ7L2J0 689 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 CYB561A3Q8NBI2 242 aa17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 SLC37A3Q8NCC5 494 aa17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 ATP6V1C2Q8NEY4 427 aa17.27■□□□□ 0.36
TSPAN4-210ENST00000464987 NEIL3Q8TAT5 605 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms