RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 GPX2P18283 190 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 IL11P20809 199 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 LSP1P33241 339 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 SUMO3P55854 103 aaPredicted RBP15.96■□□□□ 0.15
VPS52-214ENST00000463486 CLDN20P56880 219 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 FADDQ13158 208 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 ADRM1Q16186 407 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 HIST2H2BCQ6DN03 193 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 GGNQ86UU5 652 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 LIX1LQ8IVB5 337 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 NAXEQ8NCW5 288 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 OR5W2Q8NH69 310 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 LILRB4Q8NHJ6 448 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 RND1Q92730 232 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 MAL2Q969L2 176 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 ZBTB8AQ96BR9 441 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 TREX2Q9BQ50 279 aaPredicted RBP15.96■□□□□ 0.15
VPS52-214ENST00000463486 CPPED1Q9BRF8 314 aaPredicted RBP15.96■□□□□ 0.15
VPS52-214ENST00000463486 CALHM2Q9HA72 323 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 A4GALTQ9NPC4 353 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 P2RX2Q9UBL9 471 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 CHST2Q9Y4C5 530 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 CACNA1CQ13936 2221 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 ARHGAP21Q5T5U3 1957 aa15.96■□□□□ 0.15
VPS52-214ENST00000463486 MBD3L4A6NDZ8 208 aaPredicted RBP15.95■□□□□ 0.14
VPS52-214ENST00000463486 MBD3L3A6NE82 208 aaPredicted RBP15.95■□□□□ 0.14
VPS52-214ENST00000463486 MBD3L5A6NJ08 208 aaPredicted RBP15.95■□□□□ 0.14
VPS52-214ENST00000463486 GTPBP1O00178 669 aaKnown RBP15.95■□□□□ 0.14
VPS52-214ENST00000463486 CSTAP01040 98 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 GP1BBP13224 206 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 DRD4P21917 467 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 COL8A1P27658 744 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 GCKP35557 465 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 TIMP3P35625 211 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 KCNJ10P78508 379 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 SRYQ05066 204 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 SELPLGQ14242 412 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 SLC25A53Q5H9E4 307 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 RIPPLY2Q5TAB7 128 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 PLXDC2Q6UX71 529 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 EIF3MQ7L2H7 374 aaKnown RBP15.95■□□□□ 0.14
VPS52-214ENST00000463486 LACC1Q8IV20 430 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 ZNF614Q8N883 585 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 TOR1AIP2Q8NFQ8 470 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 TNIP2Q8NFZ5 429 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 MBD3L2Q8NHZ7 208 aaPredicted RBP15.95■□□□□ 0.14
VPS52-214ENST00000463486 CNOT9Q92600 299 aaKnown RBP15.95■□□□□ 0.14
VPS52-214ENST00000463486 SDCCAG3Q96C92 435 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 TMEM19Q96HH6 336 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 ADGRG7Q96K78 797 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 ANKRD27Q96NW4 1050 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 BCL2L10Q9HD36 194 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 THUMPD1Q9NXG2 353 aaKnown RBP15.95■□□□□ 0.14
VPS52-214ENST00000463486 FAM53CQ9NYF3 392 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 CLCF1Q9UBD9 225 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 KLF2Q9Y5W3 355 aaPredicted RBP15.95■□□□□ 0.14
VPS52-214ENST00000463486 AP4B1Q9Y6B7 739 aa15.95■□□□□ 0.14
VPS52-214ENST00000463486 CLDN14O95500 239 aa15.94■□□□□ 0.14
VPS52-214ENST00000463486 BCHEP06276 602 aa15.94■□□□□ 0.14
VPS52-214ENST00000463486 UBTFL6P0CB48 400 aaPredicted RBP15.94■□□□□ 0.14
VPS52-214ENST00000463486 PRKCAP17252 672 aa15.94■□□□□ 0.14
VPS52-214ENST00000463486 GRNP28799 593 aaKnown RBP15.94■□□□□ 0.14
VPS52-214ENST00000463486 ADSLP30566 484 aaPredicted RBP15.94■□□□□ 0.14
VPS52-214ENST00000463486 DLX5P56178 289 aa15.94■□□□□ 0.14
VPS52-214ENST00000463486 CTU2Q2VPK5 515 aaKnown RBP15.94■□□□□ 0.14
VPS52-214ENST00000463486 RPS26P11Q5JNZ5 115 aaPredicted RBP15.94■□□□□ 0.14
VPS52-214ENST00000463486 DHDDSQ86SQ9 333 aa15.94■□□□□ 0.14
VPS52-214ENST00000463486 C9orf106Q8NAJ2 232 aa15.94■□□□□ 0.14
VPS52-214ENST00000463486 RNF145Q96MT1 663 aa15.94■□□□□ 0.14
VPS52-214ENST00000463486 CGREF1Q99674 301 aa15.94■□□□□ 0.14
VPS52-214ENST00000463486 THUMPD3Q9BV44 507 aaKnown RBP15.94■□□□□ 0.14
VPS52-214ENST00000463486 TRIM8Q9BZR9 551 aa15.94■□□□□ 0.14
VPS52-214ENST00000463486 RAD21L1Q9H4I0 556 aa15.94■□□□□ 0.14
VPS52-214ENST00000463486 DNAJB12Q9NXW2 375 aaKnown RBP15.94■□□□□ 0.14
VPS52-214ENST00000463486 SLC35A3Q9Y2D2 325 aa15.94■□□□□ 0.14
VPS52-214ENST00000463486 DCHS2Q6V1P9 2916 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 A0A0G2JPF8 293 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 CLCA1A8K7I4 914 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 HNRNPCL2B2RXH8 293 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 HNRNPCL3B7ZW38 293 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 H0Y3Z8 333 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 H3BML4 177 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 FXYD1O00168 92 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 ANGPT2O15123 496 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 HNRNPCL1O60812 293 aaKnown RBP15.93■□□□□ 0.14
VPS52-214ENST00000463486 HNRNPCL4P0DMR1 293 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 ARAFP10398 606 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 POU3F2P20265 443 aaPredicted RBP15.93■□□□□ 0.14
VPS52-214ENST00000463486 PPIBP23284 216 aaKnown RBP15.93■□□□□ 0.14
VPS52-214ENST00000463486 ADH6P28332 368 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 CHRNB4P30926 498 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 ZNF41P51814 821 aaPredicted RBP15.93■□□□□ 0.14
VPS52-214ENST00000463486 RAC1P63000 192 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 HPCAP84074 193 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 TFF3Q07654 80 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 FOXF1Q12946 379 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 COQ5Q5HYK3 327 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 PRAMEF8Q5VWM4 474 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 PRAMEF7Q5VXH5 474 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 ACBD4Q8NC06 268 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms