RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 ZNF700Q9H0M5 742 aa12□□□□□ -0.49
NUP58-206ENST00000463407 ANKRD10Q9NXR5 420 aa12□□□□□ -0.49
NUP58-206ENST00000463407 MYEF2Q9P2K5 600 aaKnown RBP12□□□□□ -0.49
NUP58-206ENST00000463407 EMC9Q9Y3B6 208 aa12□□□□□ -0.49
NUP58-206ENST00000463407 SUSD5O60279 629 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 SLC43A1O75387 559 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 DNAJB5O75953 348 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 PTHP01270 115 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 UCHL1P09936 223 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 GLULP15104 373 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 IGFBP6P24592 240 aaPredicted RBP11.99□□□□□ -0.49
NUP58-206ENST00000463407 POGLUT1Q8NBL1 392 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 OR51T1Q8NGJ9 327 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 SLC37A2Q8TED4 501 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 BPIFA2Q96DR5 249 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 THOC3Q96J01 351 aaKnown RBP11.99□□□□□ -0.49
NUP58-206ENST00000463407 TRAV27A0A087WT01 109 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 OR7A17O14581 309 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 TNFRSF10CO14798 259 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 SFTPBP07988 381 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 BMP2P12643 396 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 PITPNBP48739 271 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 BAIAP2L2Q6UXY1 529 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 LRRC18Q8N456 261 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 PRRC1Q96M27 445 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 NECAB3Q96P71 396 aaPredicted RBP11.99□□□□□ -0.49
NUP58-206ENST00000463407 EPHX3Q9H6B9 360 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 NUP50Q9UKX7 468 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 A0A1B0GX78 115 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 KLRC4-KLRK1H3BQV0 150 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 IGHG1P01857 330 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 BMP4P12644 408 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 CD97P48960 835 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 MRPL58Q14197 206 aaKnown RBP11.99□□□□□ -0.49
NUP58-206ENST00000463407 CPOQ8IVL8 374 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 PLPP6Q8IY26 295 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 FOXN4Q96NZ1 517 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 ZNF300Q96RE9 604 aaPredicted RBP11.99□□□□□ -0.49
NUP58-206ENST00000463407 AIFM2Q9BRQ8 373 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 EDEM2Q9BV94 578 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 FOLH1BQ9HBA9 442 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 DENRO43583 198 aaKnown RBP11.99□□□□□ -0.49
NUP58-206ENST00000463407 DLSTP36957 453 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 HYAL1Q12794 435 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 KCNAB1Q14722 419 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 OBP2BQ9NPH6 170 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 CSNK1G3Q9Y6M4 447 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 EEF1E1-BLOC1S5C9J1V9 151 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 ZNF264O43296 627 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 ALOX12BO75342 701 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 HLCSP50747 726 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 SIRPAP78324 504 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 RBM39Q14498 530 aaKnown RBP11.99□□□□□ -0.49
NUP58-206ENST00000463407 TP53I3Q53FA7 332 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 WBP2Q969T9 261 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 ULBP2Q9BZM5 246 aa11.99□□□□□ -0.49
NUP58-206ENST00000463407 NOSIPQ9Y314 301 aaKnown RBP11.99□□□□□ -0.49
NUP58-206ENST00000463407 FAM230AA0A1W2PPH8 454 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 ARNTLO00327 626 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 MPPED1O15442 326 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 UGT2B10P36537 528 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 C18orf63Q68DL7 685 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 MRGPRX1Q96LB2 322 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 ZNF597Q96LX8 424 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 SLC30A3Q99726 388 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 NELFAQ9H3P2 528 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 PRDM9Q9NQV7 894 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 MAOAP21397 527 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 POU3F1Q03052 451 aaPredicted RBP11.98□□□□□ -0.49
NUP58-206ENST00000463407 SYPL1Q16563 259 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 TRIM46Q7Z4K8 759 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 KIAA0907Q7Z7F0 614 aaPredicted RBP11.98□□□□□ -0.49
NUP58-206ENST00000463407 LILRA3Q8N6C8 439 aaPredicted RBP11.98□□□□□ -0.49
NUP58-206ENST00000463407 GRPEL2Q8TAA5 225 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 LMF1Q96S06 567 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 NXF5Q9H1B4 397 aaKnown RBP11.98□□□□□ -0.49
NUP58-206ENST00000463407 FGF22Q9HCT0 170 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 MYH7BA7E2Y1 1941 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 PCDH17O14917 1159 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 ACTL6BO94805 426 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 CSF2P04141 144 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 PKLRP30613 574 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 RPL19P84098 196 aaKnown RBP11.98□□□□□ -0.49
NUP58-206ENST00000463407 MAB21L1Q13394 359 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 GGTA1PQ4G0N0 100 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 HENMT1Q5T8I9 393 aaKnown RBP11.98□□□□□ -0.49
NUP58-206ENST00000463407 FAM111BQ6SJ93 734 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 ARSKQ6UWY0 536 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 CALHM2Q9HA72 323 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 ACSS1Q9NUB1 689 aaPredicted RBP11.98□□□□□ -0.49
NUP58-206ENST00000463407 VSX1Q9NZR4 365 aaPredicted RBP11.98□□□□□ -0.49
NUP58-206ENST00000463407 COPZ2Q9P299 210 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 TRIM64BA6NI03 449 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 CRTAPO75718 401 aaPredicted RBP11.98□□□□□ -0.49
NUP58-206ENST00000463407 CCR5P51681 352 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 POLR2HP52434 150 aaKnown RBP11.98□□□□□ -0.49
NUP58-206ENST00000463407 PCBD1P61457 104 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 SLC2A12Q8TD20 617 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 LTB4R2Q9NPC1 389 aa11.98□□□□□ -0.49
NUP58-206ENST00000463407 ALG5Q9Y673 324 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms