RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 OR5W2Q8NH69 310 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 MBD3L2Q8NHZ7 208 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-206ENST00000462306 TSPEARQ8WU66 669 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 ARSGQ96EG1 525 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 LAT2Q9GZY6 243 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 MTHFD2LQ9H903 347 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-206ENST00000462306 VAPAQ9P0L0 249 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 CLCF1Q9UBD9 225 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 AP4B1Q9Y6B7 739 aa14.3□□□□□ -0.12
ERCC3-206ENST00000462306 CACNA1CQ13936 2221 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 AGAP5A6NIR3 686 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 CLCA1A8K7I4 914 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 C19orf84I3L1E1 186 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 CSTAP01040 98 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 NUDT7P0C024 238 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 BMP2P12643 396 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 RPS4Y1P22090 263 aaKnown RBP14.29□□□□□ -0.12
ERCC3-206ENST00000462306 PGM1P36871 562 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 FADDQ13158 208 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 SP5Q6BEB4 398 aaPredicted RBP14.29□□□□□ -0.12
ERCC3-206ENST00000462306 PLXDC2Q6UX71 529 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 GGNQ86UU5 652 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 RETREG3Q86VR2 466 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 DPP10Q8N608 796 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 C9orf106Q8NAJ2 232 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 TOR1AIP2Q8NFQ8 470 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 SLC38A5Q8WUX1 472 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 PMM1Q92871 262 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 RNF145Q96MT1 663 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 UCK2Q9BZX2 261 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 THUMPD1Q9NXG2 353 aaKnown RBP14.29□□□□□ -0.12
ERCC3-206ENST00000462306 KLHL14Q9P2G3 628 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 P2RX2Q9UBL9 471 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 LEF1Q9UJU2 399 aaPredicted RBP14.29□□□□□ -0.12
ERCC3-206ENST00000462306 NDUFAF1Q9Y375 327 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 DSPPQ9NZW4 1301 aa14.29□□□□□ -0.12
ERCC3-206ENST00000462306 CLDN24A6NM45 220 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 HSPB2A8KAH6 182 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 CYSRT1A8MQ03 144 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 ETV2O00321 342 aaPredicted RBP14.28□□□□□ -0.12
ERCC3-206ENST00000462306 EFNA2O43921 213 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 NTN1O95631 604 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 NUDT14O95848 222 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 UBTFL6P0CB48 400 aaPredicted RBP14.28□□□□□ -0.12
ERCC3-206ENST00000462306 PRKCAP17252 672 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 IL11P20809 199 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 EIF1P41567 113 aaKnown RBP14.28□□□□□ -0.12
ERCC3-206ENST00000462306 KCNJ10P78508 379 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 TFF3Q07654 80 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 FOXF1Q12946 379 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 HSPB2Q16082 182 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 POMZP3Q6PJE2 187 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 C10orf111Q8N326 155 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 MEIOBQ8N635 442 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 TMCO5AQ8N6Q1 288 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 FBXO27Q8NI29 283 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 C10orf82Q8WW14 230 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 WNT2BQ93097 391 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 THUMPD3Q9BV44 507 aaKnown RBP14.28□□□□□ -0.12
ERCC3-206ENST00000462306 RAD21L1Q9H4I0 556 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 IKZF5Q9H5V7 419 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 CHST11Q9NPF2 352 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 SAR1AQ9NR31 198 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.28□□□□□ -0.12
ERCC3-206ENST00000462306 SLC35A3Q9Y2D2 325 aa14.28□□□□□ -0.12
ERCC3-206ENST00000462306 UNC79Q9P2D8 2635 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 NKX2-6A6NCS4 301 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 FAM90A27PA6NNH2 459 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 SEC14L5O43304 696 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 CYP7B1O75881 506 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 IL2RAP01589 272 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 BCHEP06276 602 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 SNRPB2P08579 225 aaKnown RBP14.27□□□□□ -0.13
ERCC3-206ENST00000462306 GPX2P18283 190 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 PPIBP23284 216 aaKnown RBP14.27□□□□□ -0.13
ERCC3-206ENST00000462306 ADH6P28332 368 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 CCR4P51679 360 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 ZNF136P52737 540 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 CRISP3P54108 245 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 RAC1P63000 192 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 CBFBQ13951 182 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 QPRTQ15274 297 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 CTU2Q2VPK5 515 aaKnown RBP14.27□□□□□ -0.13
ERCC3-206ENST00000462306 RUNDC3AQ59EK9 446 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 SLC25A53Q5H9E4 307 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 ZNF787Q6DD87 383 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 METTL25Q8N6Q8 603 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 SMPDL3BQ92485 455 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 MAL2Q969L2 176 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 TMEM19Q96HH6 336 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 ADGRG7Q96K78 797 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 TREX2Q9BQ50 279 aaPredicted RBP14.27□□□□□ -0.13
ERCC3-206ENST00000462306 A4GALTQ9NPC4 353 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 CALML5Q9NZT1 146 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 GPC6Q9Y625 555 aaPredicted RBP14.27□□□□□ -0.13
ERCC3-206ENST00000462306 HEATR5AQ86XA9 2040 aa14.27□□□□□ -0.13
ERCC3-206ENST00000462306 NBPF19A0A087WUL8 3843 aa14.26□□□□□ -0.13
ERCC3-206ENST00000462306 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.26□□□□□ -0.13
ERCC3-206ENST00000462306 FBP2O00757 339 aa14.26□□□□□ -0.13
ERCC3-206ENST00000462306 DYNC1I1O14576 645 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms