RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 MIPOL1Q8TD10 442 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 GPR119Q8TDV5 335 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 JADE3Q92613 823 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 OSTF1Q92882 214 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 ARSGQ96EG1 525 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 OTUB1Q96FW1 271 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 SH3YL1Q96HL8 342 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 KLHL15Q96M94 604 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 RNF145Q96MT1 663 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 OR7D2Q96RA2 312 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 SDF2Q99470 211 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 KLHDC3Q9BQ90 382 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 PRRG4Q9BZD6 226 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 NMUR2Q9GZQ4 415 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF395Q9H8N7 513 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 AKTIPQ9H8T0 292 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 GP6Q9HCN6 339 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 DLL4Q9NR61 685 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 BEX4Q9NWD9 120 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 NOP53Q9NZM5 478 aaKnown RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 MCTS1Q9ULC4 181 aaKnown RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 EMC9Q9Y3B6 208 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 DTNAQ9Y4J8 743 aa8.2□□□□□ -1.1
BRCA1-207ENST00000461798 GPC6Q9Y625 555 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-207ENST00000461798 ACANP16112 2415 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 HRNRQ86YZ3 2850 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-207ENST00000461798 PRSS51A0A1B0GVH4 220 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 ESPNB1AK53 854 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF195O14628 629 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 ANKRD28O15084 1053 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 SIAH2O43255 324 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 OIP5O43482 229 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 GMFGO60234 142 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 SYNGR4O95473 234 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 AK1P00568 194 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 TUBBP07437 444 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 PPP3CBP16298 524 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 ME2P23368 584 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 LOXP28300 417 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-207ENST00000461798 HOXC12P31275 282 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 CCKARP32238 428 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 CARD18P57730 90 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 PPP2R2AP63151 447 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF141Q15928 474 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 HBMQ6B0K9 141 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 HEPHL1Q6MZM0 1159 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 CROCCP2Q86T23 111 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 CXorf67Q86X51 503 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-207ENST00000461798 LILRA2Q8N149 483 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 TOR1AIP2Q8NFQ8 470 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 PHOSPHO1Q8TCT1 267 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 OIT3Q8WWZ8 545 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 TESCQ96BS2 214 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 CHMP6Q96FZ7 201 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 PKNOX2Q96KN3 472 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 MRGPRX4Q96LA9 322 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 SORT1Q99523 831 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 PIP5K1AQ99755 562 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 C20orf27Q9GZN8 174 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 OR10A4Q9H209 315 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 SERHL2Q9H4I8 314 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 FANCFQ9NPI8 374 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 TIGARQ9NQ88 270 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 KLHL28Q9NXS3 571 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 CARD8Q9Y2G2 431 aa8.19□□□□□ -1.1
BRCA1-207ENST00000461798 WDR91A4D1P6 747 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 SERINC4A6NH21 518 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 GJE1A6NN92 205 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 GTPBP1O00178 669 aaKnown RBP8.18□□□□□ -1.1
BRCA1-207ENST00000461798 TNFSF11O14788 317 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 CFLARO15519 480 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF264O43296 627 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 FCMRO60667 390 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 STX11O75558 287 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 AGR2O95994 175 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 OPN1LWP04000 364 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 PRKCAP17252 672 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 MATN1P21941 496 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 KCNJ5P48544 419 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 SLC1A6P48664 564 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 CTBP2P56545 445 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 PHC1P78364 1004 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 FOXD4Q12950 439 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-207ENST00000461798 RNPS1Q15287 305 aaKnown RBP8.18□□□□□ -1.1
BRCA1-207ENST00000461798 POU4F3Q15319 338 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 PGS1Q32NB8 556 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 ARHGAP11BQ3KRB8 267 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 KRTAP21-3Q3LHN1 58 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 ANXA8L1Q5VT79 327 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 OR4F3Q6IEY1 312 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 OGFOD2Q6N063 350 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 STAC2Q6ZMT1 411 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 BEND4Q6ZU67 534 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 C22orf34Q6ZV56 151 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 CLECL1Q8IZS7 167 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 LRRC75A-AS1Q8N1F1 130 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 VPS37AQ8NEZ2 397 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 OR5W2Q8NH69 310 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 FBXO27Q8NI29 283 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 RNF128Q8TEB7 428 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms