RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 OR8J2Q8NGG1 315 aa12.5□□□□□ -0.41
USP4-206ENST00000461553 CPNE4Q96A23 557 aaPredicted RBP12.5□□□□□ -0.41
USP4-206ENST00000461553 REXO5Q96IC2 774 aaKnown RBP12.5□□□□□ -0.41
USP4-206ENST00000461553 SORT1Q99523 831 aa12.5□□□□□ -0.41
USP4-206ENST00000461553 NUF2Q9BZD4 464 aa12.5□□□□□ -0.41
USP4-206ENST00000461553 ZNF395Q9H8N7 513 aaPredicted RBP12.5□□□□□ -0.41
USP4-206ENST00000461553 C6orf203Q9P0P8 240 aaPredicted RBP12.5□□□□□ -0.41
USP4-206ENST00000461553 ICAM5Q9UMF0 924 aa12.5□□□□□ -0.41
USP4-206ENST00000461553 CLEC4AQ9UMR7 237 aa12.5□□□□□ -0.41
USP4-206ENST00000461553 CARD8Q9Y2G2 431 aa12.5□□□□□ -0.41
USP4-206ENST00000461553 DTNAQ9Y4J8 743 aa12.5□□□□□ -0.41
USP4-206ENST00000461553 GPC6Q9Y625 555 aaPredicted RBP12.5□□□□□ -0.41
USP4-206ENST00000461553 KCNE3Q9Y6H6 103 aa12.5□□□□□ -0.41
USP4-206ENST00000461553 PRR14LQ5THK1 2151 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 A0A0J9YW62 118 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 TUBBP07437 444 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 PABPC4LP0CB38 370 aaKnown RBP12.49□□□□□ -0.41
USP4-206ENST00000461553 LBPP18428 481 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 MATN1P21941 496 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 CRYGSP22914 178 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 ADH6P28332 368 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 SELENBP1Q13228 472 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 STX3Q13277 289 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 CBFBQ13951 182 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 ZNF239Q16600 458 aaKnown RBP12.49□□□□□ -0.41
USP4-206ENST00000461553 NDUFAF6Q330K2 333 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 PDZK1Q5T2W1 519 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 ANXA8L1Q5VT79 327 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 HHATQ5VTY9 493 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 GTF2IRD2BQ6EKJ0 949 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 CBLN3Q6UW01 205 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 ZNF550Q7Z398 422 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 GTF2IRD2Q86UP8 949 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 STK32CQ86UX6 486 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 ANKRD46Q86W74 232 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 LRRC34Q8IZ02 419 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 ANKRD42Q8N9B4 389 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 ZNF610Q8N9Z0 462 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 VPS37AQ8NEZ2 397 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 TOR1AIP2Q8NFQ8 470 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 RFWD2Q8NHY2 731 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 FBXO27Q8NI29 283 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 TESCQ96BS2 214 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 PIK3IP1Q96FE7 263 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 ZC3HAV1LQ96H79 300 aaKnown RBP12.49□□□□□ -0.41
USP4-206ENST00000461553 MRGPRX4Q96LA9 322 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 WFIKKN1Q96NZ8 548 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 PAIP2Q9BPZ3 127 aaKnown RBP12.49□□□□□ -0.41
USP4-206ENST00000461553 KLHDC3Q9BQ90 382 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 KLHL4Q9C0H6 718 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 C20orf27Q9GZN8 174 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 NMUR2Q9GZQ4 415 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 SERHL2Q9H4I8 314 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 TIGARQ9NQ88 270 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 EXD2Q9NVH0 621 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 HAO1Q9UJM8 370 aa12.49□□□□□ -0.41
USP4-206ENST00000461553 A0A1W2PPR1 153 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 E9PBE3 544 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 NPIPB9F8W1W9 429 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 ZNF264O43296 627 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 OIP5O43482 229 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 EIF4E2O60573 245 aaKnown RBP12.48□□□□□ -0.41
USP4-206ENST00000461553 STX11O75558 287 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 AGR2O95994 175 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 PRKCAP17252 672 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 KLK2P20151 261 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 IL11P20809 199 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 AGTR1P30556 359 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 SLC7A1P30825 629 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 KHKP50053 298 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 CARD18P57730 90 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 HPCAP84074 193 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 BST1Q10588 318 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 GPR68Q15743 365 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 TNFAIP8L3Q5GJ75 292 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 ATAD3BQ5T9A4 648 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 C6orf120Q7Z4R8 191 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 CLEC4FQ8N1N0 589 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 RNF128Q8TEB7 428 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 ZFP90Q8TF47 636 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 ARL8AQ96BM9 186 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 SDF2Q99470 211 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 TMUB1Q9BVT8 246 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 ZNF350Q9GZX5 532 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 OR51I1Q9H343 314 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 MEAF6Q9HAF1 191 aa12.48□□□□□ -0.41
USP4-206ENST00000461553 BEX4Q9NWD9 120 aaPredicted RBP12.48□□□□□ -0.41
USP4-206ENST00000461553 SERINC4A6NH21 518 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 DEFB108AA8MXU0 73 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 KIAA0513O60268 411 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 CYP7B1O75881 506 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 CPSF4O95639 269 aaKnown RBP12.47□□□□□ -0.41
USP4-206ENST00000461553 PPP3CBP16298 524 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 UQCRC2P22695 453 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 SHC1P29353 583 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 CHI3L1P36222 383 aaPredicted RBP12.47□□□□□ -0.41
USP4-206ENST00000461553 FOXD4Q12950 439 aaPredicted RBP12.47□□□□□ -0.41
USP4-206ENST00000461553 QPRTQ15274 297 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 RNPS1Q15287 305 aaKnown RBP12.47□□□□□ -0.41
USP4-206ENST00000461553 TOMM34Q15785 309 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms