RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 ZNF550Q7Z398 422 aa18.66■□□□□ 0.58
CCM2-203ENST00000461377 CDK20Q8IZL9 346 aa18.66■□□□□ 0.58
CCM2-203ENST00000461377 D2HGDHQ8N465 521 aa18.66■□□□□ 0.58
CCM2-203ENST00000461377 ZSCAN1Q8NBB4 408 aa18.66■□□□□ 0.58
CCM2-203ENST00000461377 OR1F2PQ96R84 312 aa18.66■□□□□ 0.58
CCM2-203ENST00000461377 CHCHD3Q9NX63 227 aaKnown RBP18.66■□□□□ 0.58
CCM2-203ENST00000461377 OR10H1Q9Y4A9 318 aa18.66■□□□□ 0.58
CCM2-203ENST00000461377 EML5Q05BV3 1969 aa18.65■□□□□ 0.58
CCM2-203ENST00000461377 C17orf105B2RV13 164 aa18.65■□□□□ 0.58
CCM2-203ENST00000461377 RCBTB2O95199 551 aa18.65■□□□□ 0.58
CCM2-203ENST00000461377 HTR1FP30939 366 aa18.65■□□□□ 0.58
CCM2-203ENST00000461377 RBM34P42696 430 aaKnown RBP18.65■□□□□ 0.58
CCM2-203ENST00000461377 GPLD1P80108 840 aa18.65■□□□□ 0.58
CCM2-203ENST00000461377 ITGADQ13349 1161 aa18.65■□□□□ 0.58
CCM2-203ENST00000461377 PHC2Q8IXK0 858 aa18.65■□□□□ 0.58
CCM2-203ENST00000461377 OR1L3Q8NH93 324 aa18.65■□□□□ 0.58
CCM2-203ENST00000461377 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.65■□□□□ 0.58
CCM2-203ENST00000461377 HINT3Q9NQE9 182 aaKnown RBP18.65■□□□□ 0.58
CCM2-203ENST00000461377 SIGLEC7Q9Y286 467 aa18.65■□□□□ 0.58
CCM2-203ENST00000461377 EXOGQ9Y2C4 368 aaKnown RBP18.65■□□□□ 0.58
CCM2-203ENST00000461377 SIT1Q9Y3P8 196 aa18.65■□□□□ 0.58
CCM2-203ENST00000461377 RFPL3O75679 317 aa18.64■□□□□ 0.58
CCM2-203ENST00000461377 SULT1C4O75897 302 aa18.64■□□□□ 0.58
CCM2-203ENST00000461377 CRYBB2P43320 205 aa18.64■□□□□ 0.58
CCM2-203ENST00000461377 OR1D4P47884 311 aa18.64■□□□□ 0.58
CCM2-203ENST00000461377 Q7L0L9 218 aa18.64■□□□□ 0.58
CCM2-203ENST00000461377 BMP8AQ7Z5Y6 402 aa18.64■□□□□ 0.58
CCM2-203ENST00000461377 LNX2Q8N448 690 aa18.64■□□□□ 0.58
CCM2-203ENST00000461377 BBS1Q8NFJ9 593 aa18.64■□□□□ 0.58
CCM2-203ENST00000461377 OR9Q1Q8NGQ5 310 aa18.64■□□□□ 0.58
CCM2-203ENST00000461377 OR13C2Q8NGS9 318 aa18.64■□□□□ 0.58
CCM2-203ENST00000461377 PTPMT1Q8WUK0 201 aaPredicted RBP18.64■□□□□ 0.58
CCM2-203ENST00000461377 SLC41A2Q96JW4 573 aa18.64■□□□□ 0.58
CCM2-203ENST00000461377 ENKD1Q9H0I2 346 aa18.64■□□□□ 0.58
CCM2-203ENST00000461377 ISYNA1Q9NPH2 558 aa18.64■□□□□ 0.58
CCM2-203ENST00000461377 STUB1Q9UNE7 303 aa18.64■□□□□ 0.58
CCM2-203ENST00000461377 PCDH15Q96QU1 1955 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 LIMS3P0CW19 117 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 LIMS4P0CW20 117 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 CPEP16870 476 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 BMP7P18075 431 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 ALAS2P22557 587 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 PSMA1P25786 263 aaKnown RBP18.64■□□□□ 0.57
CCM2-203ENST00000461377 RAB15P59190 212 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 SHBQ15464 509 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 LINC00114Q6XXX2 140 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 SHFQ7M4L6 423 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 PRSS42Q7Z5A4 293 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 Q8N9G6 341 aaPredicted RBP18.64■□□□□ 0.57
CCM2-203ENST00000461377 CHPT1Q8WUD6 406 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 SENP5Q96HI0 755 aaPredicted RBP18.64■□□□□ 0.57
CCM2-203ENST00000461377 YIPF2Q9BWQ6 316 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 FN3KQ9H479 309 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 CFL2Q9Y281 166 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 TP53BP1Q12888 1972 aaPredicted RBP18.64■□□□□ 0.57
CCM2-203ENST00000461377 SPTBP11277 2137 aa18.64■□□□□ 0.57
CCM2-203ENST00000461377 IGKV3D-11A0A0A0MRZ8 115 aa18.63■□□□□ 0.57
CCM2-203ENST00000461377 SERINC4A6NH21 518 aa18.63■□□□□ 0.57
CCM2-203ENST00000461377 WWP2O00308 870 aa18.63■□□□□ 0.57
CCM2-203ENST00000461377 MAGEB3O15480 346 aa18.63■□□□□ 0.57
CCM2-203ENST00000461377 MYF5P13349 255 aa18.63■□□□□ 0.57
CCM2-203ENST00000461377 ALG10BQ5I7T1 473 aa18.63■□□□□ 0.57
CCM2-203ENST00000461377 SNAP47Q5SQN1 464 aa18.63■□□□□ 0.57
CCM2-203ENST00000461377 OR2G6Q5TZ20 316 aa18.63■□□□□ 0.57
CCM2-203ENST00000461377 LIPKQ5VXJ0 399 aa18.63■□□□□ 0.57
CCM2-203ENST00000461377 THSD4Q6ZMP0 1018 aa18.63■□□□□ 0.57
CCM2-203ENST00000461377 QSOX2Q6ZRP7 698 aa18.63■□□□□ 0.57
CCM2-203ENST00000461377 DCDC5Q6ZRR9 648 aa18.63■□□□□ 0.57
CCM2-203ENST00000461377 CXXC5Q7LFL8 322 aaKnown RBP18.63■□□□□ 0.57
CCM2-203ENST00000461377 CPOQ8IVL8 374 aa18.63■□□□□ 0.57
CCM2-203ENST00000461377 OR4C3Q8NH37 302 aa18.63■□□□□ 0.57
CCM2-203ENST00000461377 DHCR7Q9UBM7 475 aaKnown RBP18.63■□□□□ 0.57
CCM2-203ENST00000461377 EFCAB7A8K855 629 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 HCN1O60741 890 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 PTP4A3O75365 173 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 ATXN8OSP0DMR3 200 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 SAGP10523 405 aaPredicted RBP18.62■□□□□ 0.57
CCM2-203ENST00000461377 FOLR1P15328 257 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 SLC37A1P57057 533 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 SMARCD3Q6STE5 483 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 GID4Q8IVV7 300 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 UBALD2Q8IYN6 164 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 ZNF485Q8NCK3 441 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 TSLPQ969D9 159 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 TRMT61AQ96FX7 289 aaKnown RBP18.62■□□□□ 0.57
CCM2-203ENST00000461377 PHOX2BQ99453 314 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 EXOSC4Q9NPD3 245 aaKnown RBP18.62■□□□□ 0.57
CCM2-203ENST00000461377 PNO1Q9NRX1 252 aaKnown RBP18.62■□□□□ 0.57
CCM2-203ENST00000461377 SOCS6O14544 535 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 IGHA1P01876 353 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 NGFRP08138 427 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 MSL3P1P0C860 447 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 SLC1A3P43003 542 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 DSG2Q14126 1118 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 RGS21Q2M5E4 152 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 PRAMEF17Q5VTA0 474 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 ULK3Q6PHR2 472 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 KIRREL2Q6UWL6 708 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 KMT5CQ86Y97 462 aa18.62■□□□□ 0.57
CCM2-203ENST00000461377 ZNF321PQ8N8H1 164 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms