RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 FOSL1P15407 271 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 RPL35P42766 123 aaKnown RBP14.36□□□□□ -0.11
LMNB1-203ENST00000460265 ZNF791Q3KP31 576 aaPredicted RBP14.36□□□□□ -0.11
LMNB1-203ENST00000460265 LRRC17Q8N6Y2 441 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 CSNK1A1LQ8N752 337 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 GATSQ8NAP1 163 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 OR4F15Q8NGB8 312 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 MRPL38Q96DV4 380 aaKnown RBP14.36□□□□□ -0.11
LMNB1-203ENST00000460265 SGTBQ96EQ0 304 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 DPH1Q9BZG8 443 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 ZSCAN32Q9NX65 697 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 NLGN3Q9NZ94 848 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 RPS6KB2Q9UBS0 482 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 CD207Q9UJ71 328 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 PLXNB3Q9ULL4 1909 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 A0A0C4DFX4 3053 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 ZAR1LA6NP61 321 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 PROM1O43490 865 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 PLRG1O43660 514 aaKnown RBP14.36□□□□□ -0.11
LMNB1-203ENST00000460265 CTSVO60911 334 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 HOXD4P09016 255 aaPredicted RBP14.36□□□□□ -0.11
LMNB1-203ENST00000460265 THEGLP0DJG4 465 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 PRKAR1AP10644 381 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 ILKQ13418 452 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 MINDY4Q4G0A6 757 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 CHMP1BQ7LBR1 199 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 OR10H4Q8NGA5 316 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 ELSPBP1Q96BH3 223 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 SLC35A4Q96G79 324 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 SAMD8Q96LT4 415 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 PHF11Q9UIL8 331 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 ADAM29Q9UKF5 820 aa14.36□□□□□ -0.11
LMNB1-203ENST00000460265 YARS2Q9Y2Z4 477 aaKnown RBP14.36□□□□□ -0.11
LMNB1-203ENST00000460265 A8MVJ9 347 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 IFNA7P01567 189 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 FUT1P19526 365 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 GPR85P60893 370 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 ZNF367Q7RTV3 350 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 MFSD9Q8NBP5 474 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 ASB12Q8WXK4 309 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 ZFYVE21Q9BQ24 234 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 MND1Q9BWT6 205 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 SEMA4GQ9NTN9 838 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 USP36Q9P275 1121 aaKnown RBP14.35□□□□□ -0.11
LMNB1-203ENST00000460265 A4GNTQ9UNA3 340 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 DENND4CQ5VZ89 1909 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 EYSQ5T1H1 3165 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 ZDBF2Q9HCK1 2354 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 SDC3O75056 442 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 PPM1BO75688 479 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 GCGRP47871 477 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 MAN2A2P49641 1150 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 PPP1CAP62136 330 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 TMEM92Q6UXU6 159 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 COMTD1Q86VU5 262 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 C9orf62Q8N4C0 152 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 CYB561A3Q8NBI2 242 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 OR9A4Q8NGU2 314 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 TMEM255BQ8WV15 326 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 FAM3CQ92520 227 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 PEX11GQ96HA9 241 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 PRRC1Q96M27 445 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 PLA2G12AQ9BZM1 189 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 KIR3DX1Q9H7L2 352 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 GSTK1Q9Y2Q3 226 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 A0A0A6YYC8 382 aaPredicted RBP14.35□□□□□ -0.11
LMNB1-203ENST00000460265 A0A1W2PQL4 384 aaPredicted RBP14.35□□□□□ -0.11
LMNB1-203ENST00000460265 SH3D21A4FU49 640 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 CCDC85CA6NKD9 419 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 I3L1I5 382 aaPredicted RBP14.35□□□□□ -0.11
LMNB1-203ENST00000460265 GPX5O75715 221 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 RPL4P36578 427 aaKnown RBP14.35□□□□□ -0.11
LMNB1-203ENST00000460265 MTNR1AP48039 350 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 HHEXQ03014 270 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 ZNF658BQ4V348 819 aaPredicted RBP14.35□□□□□ -0.11
LMNB1-203ENST00000460265 ZNF57Q68EA5 555 aaPredicted RBP14.35□□□□□ -0.11
LMNB1-203ENST00000460265 OR51L1Q8NGJ5 315 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 RBPMSQ93062 196 aaKnown RBP14.35□□□□□ -0.11
LMNB1-203ENST00000460265 GAL3ST3Q96A11 431 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 SECISBP2Q96T21 854 aaKnown RBP14.35□□□□□ -0.11
LMNB1-203ENST00000460265 MED20Q9H944 212 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 LYARQ9NX58 379 aaKnown RBP14.35□□□□□ -0.11
LMNB1-203ENST00000460265 BAIAP2Q9UQB8 552 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 MRPS2Q9Y399 296 aaKnown RBP14.35□□□□□ -0.11
LMNB1-203ENST00000460265 ZNF175Q9Y473 711 aa14.35□□□□□ -0.11
LMNB1-203ENST00000460265 PIP5K1CO60331 668 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 TRIM3O75382 744 aaPredicted RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 REM1O75628 298 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 SLC2A2P11168 524 aaPredicted RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 PEBP1P30086 187 aaKnown RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 SSTR2P30874 369 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 TNFRSF4P43489 277 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 HNRNPA0Q13151 305 aaKnown RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 RUNX2Q13950 521 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 ELOAQ14241 798 aaKnown RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 ZNHIT3Q15649 155 aaPredicted RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 DUSP5Q16690 384 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 FBXO42Q6P3S6 717 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 RANBP3LQ86VV4 465 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms